| Literature DB >> 31009533 |
Marten J Edwards1, James C Russell2, Emily N Davidson1, Thomas J Yanushefski1, Bess L Fleischman1, Rachel O Heist1, Julia G Leep-Lazar1, Samantha L Stuppi1, Rita A Esposito1, Louise M Suppan3.
Abstract
Questing ticks were surveyed by dragging in forested habitats within the Lehigh Valley region of eastern Pennsylvania for four consecutive summers (2015-2018). A high level of inter-annual variation was found in the density of blacklegged tick nymphs, Ixodes scapularis Say, with a high density of host-seeking nymphs (DON) in summer 2015 and 2017 and a relatively low DON in summer 2016 and 2018. Very few American dog ticks (Dermacentor variabilis Say) and Ixodes cookei Packard were collected. Lone star ticks (Amblyomma americanum L.) and longhorned ticks (Haemaphysalis longicornis Neumann) were not represented among the 6,398 ticks collected. For tick-borne pathogen surveillance, DNA samples from 1,721 I. scapularis nymphs were prepared from specimens collected in summers 2015-2017 and screened using qPCR, high resolution melting analysis, and DNA sequencing when necessary. The overall 3-yr nymphal infection prevalence of Borrelia burgdorferi was 24.8%, Borrelia miyamotoi was 0.3%, Anaplasma phagocytophilum variant-ha was 0.8%, and Babesia microti was 2.8%. Prevalence of coinfection with B. burgdorferi and B. microti as well as B. burgdorferi and A. phagocytophilum variant-ha were significantly higher than would be expected by independent infection. B. burgdorferi nymphal infection prevalence is similar to what other studies have found in the Hudson Valley region of New York, but levels of B. microti and A. phagocytophilum variant-ha nymphal infection prevalence are relatively lower. This study reinforces the urgent need for continued tick and pathogen surveillance in the Lehigh Valley region.Entities:
Keywords: Lyme disease; anaplasmosis; babesiosis; surveillance; tick
Mesh:
Year: 2019 PMID: 31009533 PMCID: PMC6595528 DOI: 10.1093/jme/tjz043
Source DB: PubMed Journal: J Med Entomol ISSN: 0022-2585 Impact factor: 2.278
Fig. 1.Location of study sites. AT: Alburtis Mountain Road Tract (40.506, −75.598); LH: Little Lehigh Headwaters Wildlife Park (40.480, −75.694); BP: B. Leroy and Elizabeth Burkhart Preserve (40.516, −75.487); SP: South Mountain Preserve, Wildlands Conservancy (40.547, −75.476); GA: Graver Arboretum of Muhlenberg College (40.800, −75.359); LM: Lehigh Mountain Park 40.604, −75.423); RM: Riemert Memorial Bird Haven, Wildlands Conservancy (40.502, −75.563); RP: Raker Preserve, Muhlenberg College (40.692, −75.706); SM: South Mountain Park (40.599, −75.371); SW: Scholl Woodlands Preserve (40.564, −75.434); TP: Trexler Preserve (40.658, −75.622). Inset, the three shaded counties of Pennsylvania are from right to left, Berks, Lehigh, and Northampton.
Primers unique to this study
| Species | Gene | Accession | Primer sequence |
|---|---|---|---|
|
| p66 F | AY363724.1 | GGTATTGGTTTCGCTTGGAA |
| p66 R | TCCAATTCCAACTCCAGATTTT | ||
|
| p66 F | KM676035.1 | GATCCAAATGGCAATGCTCT |
| p66 R | AATCGCCCAGGATTCTTTTT | ||
|
| 18S rDNA F | XR_002459986.1 | AACGAGACCTTAACCTGC |
|
| 18S rDNA R | AY046577.1 | ACAGACCTGTTATTGCCTTA |
|
|
| KU705196.1 |
|
Total ticks collected by dragging at 11 forested sites in the Lehigh Valley region
| Species | 2015 | 2016 | 2017 | 2018 | Total |
|---|---|---|---|---|---|
|
| 30 | 11 | 14 | 23 | 78 |
|
| 1,444 | 841 | 2,721 | 1,275 | 6,281 |
|
| 15 | 2 | 13 | 6 | 36 |
|
| 0 | 0 | 0 | 0 | 0 |
|
| 0 | 0 | 0 | 0 | 0 |
|
| 0 | 2 | 0 | 1 | 3 |
Over 450 drags (~30 min total, ~10 min while moving, ~620 m) were performed at a slow walking pace. An average of 11 drags (SD = 6) were performed at each site, each year. All samples were collected in the early summer season and site locations are shown in Fig. 1.
Fig. 2.DON at individual field sites. DON is estimated as the average number I. scapularis nymphs/100 m2 in drags that were performed at each site, each year. Abbreviations and locations of sites are shown in Fig. 1. Error bars are represented as SEM.
Fig. 3.Negative Binomial Regression model for DON based on year. The response variable is nymphs/100 m2 per day, as estimated from time while moving from individual GPX files using GPXSee version 5.17. Each dot on the graph represents the expected nymphs/100 m2 collected using the negative binomial regression model in a particular year. The lower and upper bounds represent the 95% credible interval.
Overall nymphal infection prevalence at 11 sites in the Lehigh Valley region of eastern Pennsylvania (2015–2017)
| Year, Percent | 2015 | % | 2016 | % | 2017 | % | 3-yr | % | 95CI | 95CI |
|---|---|---|---|---|---|---|---|---|---|---|
| Nymphs tested | 599 | 558 | 564 | 1,721 | lower | upper | ||||
|
| 145 | 24.2 | 124 | 22.2 | 158 | 28.0 | 427 | 24.8 | 22.8 | 26.9 |
|
| 0 | 0 | 3 | 0.5 | 3 | 0.5 | 6 | 0.3 | 0.1 | 0.7 |
|
| 12 | 2.0 | 17 | 3.0 | 19 | 3.4 | 48 | 2.8 | 2.1 | 3.7 |
| Ap-v1 | 7 | 1.2 | 21 | 3.8 | 17 | 3.0 | 45 | 2.6 | 1.9 | 3.5 |
| Ap-ha | 5 | 0.8 | 5 | 0.9 | 4 | 0.7 | 14 | 0.8 | 0.5 | 1.3 |
|
| 4 | 0.7 | 10 | 1.8 | 11 | 2.0 | 25 | 1.5 | 1.0 | 2.1 |
|
| 4 | 0.7 | 3 | 0.5 | 3 | 0.5 | 10 | 0.6 | 0.3 | 1.0 |
|
| 1 | 0.2 | 2 | 0.4 | 1 | 0.2 | 4 | 0.2 | 0.1 | 0.6 |
|
| 0 | 0 | 1 | 0.2 | 0 | 0 | 1 | 0.06 | 0 | 0.3 |
Ap-v1 is the strain of A. phagocytophilum that is not known to infect humans. Ap-ha is the human-active strain. The total infected counts and percent infected are presented for each pathogen each year. The 95CI represents the 95% Bayesian credible interval for each percentage value.
Fig. 4.B. burgdorferi nymphal infection prevalence at individual sites. Each dot on the graph represents the expected infection prevalence at each site aggregated across the years 2015–2017. The lower and upper bounds represent the 95CI. Abbreviations and locations of sites are shown in Fig. 1.
Permutation test for nymphal coinfection
| Coinfection type | Mean Expected. Count | 2.5% quantile | Median | 97.5% quantile | Actual Count |
| Observed: |
|---|---|---|---|---|---|---|---|
|
| 16 | 0 | 16 | 22 | 25 | 0.002 | 1.584 |
|
| 3 | 0 | 3 | 6 | 10 | 0.00006 | 3.289 |
|
| 11 | 6 | 11 | 17 | 4 | 0.999 | 0.355 |
|
| 14 | 8 | 14 | 20 | 14 | 0.545 | 1.005 |
Predicted and observed counts of coinfected questing nymphal I. scapularis among a sample of 1,721 specimens using a permutation analysis assuming independent infections with B. burgdorferi, B. microti, and two strains of A. phagocytophilum. The mean, median, and quantiles are determined from the random permutations.
DON and climate variables
| Year | Avg DON | Avg DON | Harsh spring conditions | Warm winter conditions | Total | Jan. Ppt. (all form) (cm) | Jan. snowfall (cm) | Cold Jan. days |
|---|---|---|---|---|---|---|---|---|
| 2015 | 4.2 | 115 | 16 | 118 | 127.3 | 6.9 | 32.5 | 10 |
| 2016 | 1.5 | 43 | 35 | 140 | 91.9 | 8.1 | 82.0 | 9 |
| 2017 | 6.9 | 209 | 31 | 145 | 71.9 | 5.6 | 5.6 | 4 |
| 2018 | 1.0 | 34 | 15 | 135 | 106.8 | 8.1 | 16.0 | 14 |
Annual density of nymphs (DON) in nymphs/100 m2 estimates with 95CI are also shown in Fig. 3. DON/h are time while moving using estimates from individual .gpx files of each drag using GPXSee version 5.17. Climate variables: harsh spring conditions is the number of days (Feb. 1 to April 30 of the same year with RH < 50% and daily temp min > 15°C), warm winter conditions is the number of days (Nov. 1 to Mar. 31 with temp. min > −10°C), and winter snowfall (Nov. 1 to Mar. 31 of the previous winter, in cm) were incorporated into models by Ostfeld et al. (2018). Jan. snowfall was used in models by Hayes et al. (2015). Cold Jan. days is the number of days in Jan. of the same year with min temp. < −10°C. All data are from the Lehigh Valley Airport weather station (KABE) and accessed from Network for Environment and Weather Applications (Cornell University) or NOAA Climate Data Online.