| Literature DB >> 34583754 |
Anna Bajer1, Dorota Dwużnik-Szarek2.
Abstract
BACKGROUND: Babesia spp. are protozoan parasites of great medical and veterinary importance, especially in the northern Hemisphere. Ticks are known vectors of Babesia spp., although some Babesia-tick interactions have not been fully elucidated.Entities:
Keywords: Phylogenetic analysis; Piroplasm; Polymerase chain reaction; Sequencing; Ticks
Mesh:
Year: 2021 PMID: 34583754 PMCID: PMC8480096 DOI: 10.1186/s13071-021-05019-3
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Species of Babesia reported in Dermacentor spp.
| Country | Reference | Species of | Species identification method | ||
|---|---|---|---|---|---|
| Austria | Hodžić et al. [ | 10% | PCR sequencing | ||
| Austria | Leschnik et al. [ | 16.7% | PCR sequencing | ||
| Belgium, the Netherlands, Germany, UK | Sprong et al. [ | 0.9% | PCR sequencing | ||
| Belgium, the Netherlands | Jongejan et al. [ | 1.9% | PCR sequencing | ||
| France | Bonnet et al. [ | 0.6% | PCR-RLB for selected | ||
| 0% | - | ||||
| Germany | Galfsky et al. [ | 3.3% | PCR sequencing | ||
| Germany | Silaghi et al. [ | 0.3% | PCR sequencing | ||
| Hungary | Hornok et al. [ | 8.2% | PCR sequencing | ||
| Lithuania and Latvia | Radzijevskaja et al. [ | 1.3% | PCR sequencing | ||
| Poland | Bajer et al. [ | 3.4% | PCR sequencing | ||
| Poland | Mierzejewska et al. [ | 4.2% (108) | PCR sequencing | ||
| Poland | Wojcik-Fatla et al. [ | 4.5% | PCR sequencing | ||
| Poland | Wojcik-Fatla et al. [ | 2.7% | PCR sequencing | ||
| Romania | Corduneanu et al. [ | 8% MIR | PCR sequencing | ||
| Russia | Rar et al. [ | 3.6% | PCR sequencing | ||
| Slovakia | Majláthová et al. [ | 36% | PCR sequencing | ||
| Slovakia | Svehlová et al. [ | 1.8% | PCR sequencing | ||
| Slovenia | Duh et al. [ | 1% | PCR sequencing | ||
| Spain | Garcia-Sanmartin et al. [ | 5% | PCR-RLB | ||
| Switzerland | Schaarschmidt et al. [ | 39% | PCR sequencing | ||
| Ukraine | Karbowiak et al. [ | 3.4% | PCR sequencing | ||
| Ukraine | Rogovskyy et al. [ | 4% | PCR sequencing | ||
| USA | Swei et al. [ | 7.2% | PCR sequencing | ||
| China | Abdallah et al. [ | 4.8% | RLB, PCR sequencing | ||
| Mongolia | Battsetseg et al. [ | 6.5% MIR | Species-specific PCR |
MIR Minimal infection rate, PCR polymerase chain reaction, RLB reverse line blot
aQuesting and feeding ticks
Fig. 1 a–jPercentage share of certain tick species as the source of 18S ribosomal DNA (rDNA) sequences of specific Babesia species. a 70 sequences of Babesia vogeli: from Brazil (n = 1), China (n = 5), Cuba (n = 1), Egypt (n = 4), France (n = 29), India (n = 4), Portugal (n = 1), Taiwan (n = 22), Tunisia (n = 1), Palestine (n = 2). b 41 sequences of Babesia canis: from Austria (n = 1), Hungary (n = 5), Italy (n = 2), Kazakhstan (n = 1), Latvia (n = 1), Lithuania (n = 6), Poland (n = 6), Romania (n = 3), Russia (n = 2), Serbia (n = 2), Slovakia (n = 7), Ukraine (n = 4), UK (n = 1). c 11 sequences of Babesia rossi: from Nigeria (n = 3), Turkey (n = 8). d 64 sequences of Babesia venatorum: from China (n = 3), Czech Republic (n = 4), Germany (n = 2), Japan (n = 1), Latvia (n = 6), Lithuania (n = 2), Mongolia (n = 14), Norway (n = 12), Romania (n = 1), Russia (n = 2), Slovakia (n = 1), Sweden (n = 15), Great Britain (n = 1). e Babesia bovis: four sequences from Egypt. f 34 sequences of Babesia divergens: from Belgium (n = 3), China (n = 5), Germany (n = 3), Japan (n = 14), Luxembourg (n = 1), the Netherlands (n = 1), Norway (n = 3), Russia (n = 1), Sweden (n = 1), Switzerland (n = 2). g 17 sequences of Babesia crassa: from China (n = 1), Hungary (n = 3), Russia (n = 1), Turkey (n = 12). h 19 sequences of Babesia capreoli: from Belgium (n = 2), Germany (n = 6), Latvia (n = 2), Italy (n = 2), Norway (n = 2), Poland (n = 2), Slovakia (n = 2), South Korea (n = 1). i 102 sequences of Babesia microti: from Austria (n = 1), Belarus (n = 3), Belgium (n = 3), China (n = 2), Estonia (n = 8), Germany (n = 27), Japan (n = 4), Latvia (n = 11), Lithuania (n = 1), Luxembourg (n = 3), Mongolia (n = 21), Poland (n = 2), Russia (n = 3), Slovakia (n = 1), Sweden (n = 10), Ukraine (n = 2), USA (n = 6). j 25 sequences of Babesia caballi: from Brazil (n = 2), Bulgaria (n = 1), China (n = 7), Ethiopia (n = 1), Guinea (n = 2), Italy (n = 1), Kenya (n = 4), Malaysia (n = 3), Mongolia (n = 2)
Species of Babesia reported in tick species other than Ixodes or Dermacentor spp.
| Country | Reference | Tick species ( | Species identification method | ||
|---|---|---|---|---|---|
| Czech Republic, Slovakia | Rybarova et al. [ | 4% | PCR sequencing | ||
| USA | Shock et al. [ | 3.3% | PCR sequencing | ||
| China | Abdallah et al. [ | 13.5% | PCR-RLB, PCR sequencing | ||
| China | Li et al. [ | 0.4% | PCR sequencing | ||
| China | Zhuang et al. [ | 0.7% | (0.7%) | NGS | |
| China | Niu et al. [ | 21.3% | Species-specific PCR | ||
| 9.7% | |||||
| Hungary | Hornok et al. [ | NC | PCR sequencing (pools) | ||
| NC | |||||
| NC | No | ||||
| Spain | Garcia-Sanmartin et al. [ | 1.1% | PCR-RLB | ||
| 4.5% | |||||
| 0% | |||||
| 4% | |||||
| Slovakia | Hamšíková et al. [ | 6.6% | PCR sequencing | ||
| Turkey | Brinkmann et al. [ | 1.3% | NGS | ||
| Turkey | Orkun et al. [ | 1.6% | PCR sequencing | ||
| 12% | |||||
1 (1%) | |||||
| 11% | 1 (11%) | ||||
| Israel | Harrus et al. [ | 1.2% MIR | (1.2%) | PCR sequencing (pools) | |
| 4.2% MIR | |||||
| 0% | |||||
| Italy | Romiti et al. [ | 14.6% pools | (14.5%) | qPCR with TaqMan probe for | |
| Japan | Masatani et al. [ | 1.3% | PCR sequencing | ||
| 1.6% | |||||
| 0% | |||||
| Japan | Sivakumar et al. [ | 9.7% | Species-specific PCR for | ||
| Thailand | Wattanamethanont et al. [ | 0.2% (1/419 pools) | (0.2% pools) | PCR sequencing |
MIR for tick pools
NGS Next-generation sequencing, qPCR quantitative PCR, NC not calculated (pools with different number of ticks tested); for other abbreviations, see Table 1
aMostly questing, but also some feeding ticks tested together
Fig. 2Molecular phylogenetic analysis of 18S rDNA of selected Babesia spp. (550 base pairs). The evolutionary history was inferred by using the maximum likelihood method and the Kimura two-parameter model. The tree with the highest log likelihood (− 2752,03) is shown. The percentage of trees in which the associated taxa clustered together is shown next to the branches. Initial tree(s) for the heuristic search were obtained automatically by applying neighbour-joining and BioNJ algorithms to a matrix of pairwise distances estimated using the maximum composite likelihood approach, and then selecting the topology with a superior log likelihood value. A discrete γ distribution was used to model evolutionary rate differences among sites [five categories (+ G, parameter = 2,1600)]. This analysis involved 32 nucleotide sequences. There were a total of 458 positions in the final dataset. Evolutionary analyses were conducted in MEGA X