Literature DB >> 31003983

Mode of Action of GH30-7 Reducing-End Xylose-Releasing Exoxylanase A (Xyn30A) from the Filamentous Fungus Talaromyces cellulolyticus.

Yusuke Nakamichi1, Thierry Fouquet2, Shotaro Ito3, Akinori Matsushika1,4, Hiroyuki Inoue5.   

Abstract

In this study, we characterized the mode of action of reducing-end xylose-releasing exoxylanase (Rex), which belongs to the glycoside hydrolase family 30-7 (GH30-7). GH30-7 Rex, isolated from the cellulolytic fungus Talaromyces cellulolyticus (Xyn30A), exists as a dimer. The purified Xyn30A released xylose from linear xylooligosaccharides (XOSs) 3 to 6 xylose units in length with similar kinetic constants. Hydrolysis of branched, borohydride-reduced, and p-nitrophenyl XOSs clarified that Xyn30A possesses a Rex activity. 1H nuclear magnetic resonance (1H NMR) analysis of xylotriose hydrolysate indicated that Xyn30A degraded XOSs via a retaining mechanism and without recognizing an anomeric structure at the reducing end. Hydrolysis of xylan by Xyn30A revealed that the enzyme continuously liberated both xylose and two types of acidic XOSs: 22-(4-O-methyl-α-d-glucuronyl)-xylotriose (MeGlcA2Xyl3) and 22-(MeGlcA)-xylobiose (MeGlcA2Xyl2). These acidic products were also detected during hydrolysis using a mixture of MeGlcA2Xyl n (n = 2 to 14) as the substrate. This indicates that Xyn30A can release MeGlcA2Xyl n (n = 2 and 3) in an exo manner. Comparison of subsites in Xyn30A and GH30-7 glucuronoxylanase using homology modeling suggested that the binding of the reducing-end residue at subsite +2 was partially prevented by a Gln residue conserved in GH30-7 Rex; additionally, the Arg residue at subsite -2b, which is conserved in glucuronoxylanase, was not found in Xyn30A. Our results lead us to propose that GH30-7 Rex plays a complementary role in hydrolysis of xylan by fungal cellulolytic systems.IMPORTANCE Endo- and exo-type xylanases depolymerize xylan and play crucial roles in the assimilation of xylan in bacteria and fungi. Exoxylanases release xylose from the reducing or nonreducing ends of xylooligosaccharides; this is generated by the activity of endoxylanases. β-Xylosidase, which hydrolyzes xylose residues on the nonreducing end of a substrate, is well studied. However, the function of reducing-end xylose-releasing exoxylanases (Rex), especially in fungal cellulolytic systems, remains unclear. This study revealed the mode of xylan hydrolysis by Rex from the cellulolytic fungus Talaromyces cellulolyticus (Xyn30A), which belongs to the glycoside hydrolase family 30-7 (GH30-7). A conserved residue related to Rex activity is found in the substrate-binding site of Xyn30A. These findings will enhance our understanding of the function of GH30-7 Rex in the cooperative hydrolysis of xylan by fungal enzymes.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  Talaromyces cellulolyticuszzm321990; exoxylanase; glycoside hydrolase family 30; lignocellulose; xylan; xylooligosaccharide

Year:  2019        PMID: 31003983      PMCID: PMC6581162          DOI: 10.1128/AEM.00552-19

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  8 in total

1.  A new synergistic relationship between xylan-active LPMO and xylobiohydrolase to tackle recalcitrant xylan.

Authors:  Anastasia Zerva; Christina Pentari; Sacha Grisel; Jean-Guy Berrin; Evangelos Topakas
Journal:  Biotechnol Biofuels       Date:  2020-08-10       Impact factor: 6.040

2.  Crystal structure of GH30-7 endoxylanase C from the filamentous fungus Talaromyces cellulolyticus.

Authors:  Yusuke Nakamichi; Tatsuya Fujii; Masahiro Watanabe; Akinori Matsushika; Hiroyuki Inoue
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-07-28       Impact factor: 1.056

3.  GH30-7 Endoxylanase C from the Filamentous Fungus Talaromyces cellulolyticus.

Authors:  Yusuke Nakamichi; Tatsuya Fujii; Thierry Fouquet; Akinori Matsushika; Hiroyuki Inoue
Journal:  Appl Environ Microbiol       Date:  2019-10-30       Impact factor: 4.792

4.  Purification and characterization of an endo-xylanase from Trichoderma sp., with xylobiose as the main product from xylan hydrolysis.

Authors:  Li-Hao Fu; Nan Jiang; Cheng-Xi Li; Xue-Mei Luo; Shuai Zhao; Jia-Xun Feng
Journal:  World J Microbiol Biotechnol       Date:  2019-10-31       Impact factor: 3.312

5.  Substrate recognition by a bifunctional GH30-7 xylanase B from Talaromyces cellulolyticus.

Authors:  Yusuke Nakamichi; Masahiro Watanabe; Akinori Matsushika; Hiroyuki Inoue
Journal:  FEBS Open Bio       Date:  2020-05-22       Impact factor: 2.693

6.  Characterization of fructooligosaccharide metabolism and fructooligosaccharide-degrading enzymes in human commensal butyrate producers.

Authors:  Hiroki Tanno; Tadashi Fujii; Katsuaki Hirano; Shintaro Maeno; Takashi Tonozuka; Mitsuo Sakamoto; Moriya Ohkuma; Takumi Tochio; Akihito Endo
Journal:  Gut Microbes       Date:  2021 Jan-Dec

7.  Yeast GH30 Xylanase from Sugiyamaella lignohabitans Is a Glucuronoxylanase with Auxiliary Xylobiohydrolase Activity.

Authors:  Katarína Šuchová; Andrej Chyba; Zuzana Hegyi; Martin Rebroš; Vladimír Puchart
Journal:  Molecules       Date:  2022-01-25       Impact factor: 4.411

8.  Engineering and screening of novel β-1,3-xylanases with desired hydrolysate type by optimized ancestor sequence reconstruction and data mining.

Authors:  Bo Zeng; ShuYan Zhao; Rui Zhou; YanHong Zhou; WenHui Jin; ZhiWei Yi; GuangYa Zhang
Journal:  Comput Struct Biotechnol J       Date:  2022-06-27       Impact factor: 6.155

  8 in total

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