Literature DB >> 30992545

Quality and quantity control of gene expression by nonsense-mediated mRNA decay.

Tatsuaki Kurosaki1,2, Maximilian W Popp1,2, Lynne E Maquat3,4.   

Abstract

Nonsense-mediated mRNA decay (NMD) is one of the best characterized and most evolutionarily conserved cellular quality control mechanisms. Although NMD was first found to target one-third of mutated, disease-causing mRNAs, it is now known to also target ~10% of unmutated mammalian mRNAs to facilitate appropriate cellular responses - adaptation, differentiation or death - to environmental changes. Mutations in NMD genes in humans are associated with intellectual disability and cancer. In this Review, we discuss how NMD serves multiple purposes in human cells by degrading both mutated mRNAs to protect the integrity of the transcriptome and normal mRNAs to control the quantities of unmutated transcripts.

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Year:  2019        PMID: 30992545      PMCID: PMC6855384          DOI: 10.1038/s41580-019-0126-2

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  211 in total

1.  Rules that govern UPF1 binding to mRNA 3' UTRs.

Authors:  Tatsuaki Kurosaki; Lynne E Maquat
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-12       Impact factor: 11.205

2.  Evidence that phosphorylation of human Upfl protein varies with intracellular location and is mediated by a wortmannin-sensitive and rapamycin-sensitive PI 3-kinase-related kinase signaling pathway.

Authors:  M Pal; Y Ishigaki; E Nagy; L E Maquat
Journal:  RNA       Date:  2001-01       Impact factor: 4.942

3.  Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay.

Authors:  Isao Kashima; Akio Yamashita; Natsuko Izumi; Naoyuki Kataoka; Ryo Morishita; Shinichi Hoshino; Mutsuhito Ohno; Gideon Dreyfuss; Shigeo Ohno
Journal:  Genes Dev       Date:  2006-02-01       Impact factor: 11.361

4.  The role of Upf proteins in modulating the translation read-through of nonsense-containing transcripts.

Authors:  W Wang; K Czaplinski; Y Rao; S W Peltz
Journal:  EMBO J       Date:  2001-02-15       Impact factor: 11.598

5.  The majority of yeast UPF1 co-localizes with polyribosomes in the cytoplasm.

Authors:  A L Atkin; N Altamura; P Leeds; M R Culbertson
Journal:  Mol Biol Cell       Date:  1995-05       Impact factor: 4.138

6.  The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs.

Authors:  K Czaplinski; M J Ruiz-Echevarria; S V Paushkin; X Han; Y Weng; H A Perlick; H C Dietz; M D Ter-Avanesyan; S W Peltz
Journal:  Genes Dev       Date:  1998-06-01       Impact factor: 11.361

7.  Upf1 senses 3'UTR length to potentiate mRNA decay.

Authors:  J Robert Hogg; Stephen P Goff
Journal:  Cell       Date:  2010-10-29       Impact factor: 41.582

8.  The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon.

Authors:  P Leeds; S W Peltz; A Jacobson; M R Culbertson
Journal:  Genes Dev       Date:  1991-12       Impact factor: 11.361

9.  Interactions between UPF1, eRFs, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways.

Authors:  Pavel V Ivanov; Niels H Gehring; Joachim B Kunz; Matthias W Hentze; Andreas E Kulozik
Journal:  EMBO J       Date:  2008-02-07       Impact factor: 11.598

10.  A competition between stimulators and antagonists of Upf complex recruitment governs human nonsense-mediated mRNA decay.

Authors:  Guramrit Singh; Indrani Rebbapragada; Jens Lykke-Andersen
Journal:  PLoS Biol       Date:  2008-04-29       Impact factor: 8.029

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Journal:  Cancer Metastasis Rev       Date:  2020-09       Impact factor: 9.264

3.  Nonsense-Mediated RNA Decay Factor UPF1 Is Critical for Posttranscriptional and Translational Gene Regulation in Arabidopsis.

Authors:  Vivek K Raxwal; Craig G Simpson; Jiradet Gloggnitzer; Juan Carlos Entinze; Wenbin Guo; Runxuan Zhang; John W S Brown; Karel Riha
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Review 4.  Proteomic and interactomic insights into the molecular basis of cell functional diversity.

Authors:  Isabell Bludau; Ruedi Aebersold
Journal:  Nat Rev Mol Cell Biol       Date:  2020-03-31       Impact factor: 94.444

Review 5.  Short interspersed nuclear element (SINE)-mediated post-transcriptional effects on human and mouse gene expression: SINE-UP for active duty.

Authors:  Lynne E Maquat
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-10       Impact factor: 6.237

Review 6.  Grainyhead-like transcription factors in cancer - Focus on recent developments.

Authors:  Grzegorz Kotarba; Agnieszka Taracha-Wisniewska; Tomasz Wilanowski
Journal:  Exp Biol Med (Maywood)       Date:  2020-02-02

7.  Loss of the fragile X syndrome protein FMRP results in misregulation of nonsense-mediated mRNA decay.

Authors:  Tatsuaki Kurosaki; Naoto Imamachi; Christoph Pröschel; Shuhei Mitsutomi; Rina Nagao; Nobuyoshi Akimitsu; Lynne E Maquat
Journal:  Nat Cell Biol       Date:  2021-01-08       Impact factor: 28.824

8.  Translation-dependent unwinding of stem-loops by UPF1 licenses Regnase-1 to degrade inflammatory mRNAs.

Authors:  Takashi Mino; Noriki Iwai; Masayuki Endo; Kentaro Inoue; Kotaro Akaki; Fabian Hia; Takuya Uehata; Tomoko Emura; Kumi Hidaka; Yutaka Suzuki; Daron M Standley; Mariko Okada-Hatakeyama; Shigeo Ohno; Hiroshi Sugiyama; Akio Yamashita; Osamu Takeuchi
Journal:  Nucleic Acids Res       Date:  2019-09-19       Impact factor: 16.971

9.  ZCWPW1 is recruited to recombination hotspots by PRDM9 and is essential for meiotic double strand break repair.

Authors:  Daniel Wells; Emmanuelle Bitoun; Daniela Moralli; Gang Zhang; Anjali Hinch; Julia Jankowska; Peter Donnelly; Catherine Green; Simon R Myers
Journal:  Elife       Date:  2020-08-03       Impact factor: 8.140

10.  Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA.

Authors:  Kyle T Powers; Flint Stevenson-Jones; Sathish K N Yadav; Beate Amthor; Joshua C Bufton; Ufuk Borucu; Dakang Shen; Jonas P Becker; Daria Lavysh; Matthias W Hentze; Andreas E Kulozik; Gabriele Neu-Yilik; Christiane Schaffitzel
Journal:  Nucleic Acids Res       Date:  2021-07-21       Impact factor: 16.971

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