Literature DB >> 30989354

Bacterial Community Composition and Diversity Respond to Nutrient Amendment but Not Warming in a Maritime Antarctic Soil.

Kevin K Newsham1, Binu M Tripathi2, Ke Dong3, Naomichi Yamamoto4, Jonathan M Adams5, David W Hopkins6.   

Abstract

A resumption of climate warming in maritime Antarctica, arising from continued greenhouse gas emissions to the atmosphere, is predicted to lead to further expansions of plant populations across the region, with consequent increases in nutrient inputs to soils. Here, we test the main and interactive effects of warming, applied with open top chambers (OTCs), and nutrient amendment with tryptic soy broth (TSB), an artificial growth substrate, on bacterial community composition and diversity using Illumina sequencing of 16S rRNA genes in soil from a field experiment in the southern maritime Antarctic. Substantial effects of TSB application on bacterial communities were identified after 49 months, including reduced diversity, altered phylogenetic community assembly processes, increased Proteobacteria-to-Acidobacteria ratios and significant divergence in community composition, notably increases in the relative abundances of the gram-positive genera Arthrobacter, Paeniglutamicibacter and Planococcus. Contrary to previous observations from other maritime Antarctic field warming experiments, we recorded no effects of warming with OTCs, or interactive effects of OTCs and TSB application, on bacterial community composition or diversity. Based on these findings, we conclude that further warming of the maritime Antarctic is unlikely to influence soil bacterial community composition or diversity directly, but that increased nutrient inputs arising from enhanced plant growth across the region may affect the composition of soil bacterial communities, with possible effects on ecosystem productivity.

Keywords:  Antarctica; Bacterial community composition; Climate warming; Gram-positive and gram-negative bacteria; Nutrient inputs; Proteobacteria-to-Acidobacteria ratio

Mesh:

Substances:

Year:  2019        PMID: 30989354     DOI: 10.1007/s00248-019-01373-z

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  37 in total

1.  Stochastic and deterministic assembly processes in subsurface microbial communities.

Authors:  James C Stegen; Xueju Lin; Allan E Konopka; James K Fredrickson
Journal:  ISME J       Date:  2012-03-29       Impact factor: 10.302

2.  Picante: R tools for integrating phylogenies and ecology.

Authors:  Steven W Kembel; Peter D Cowan; Matthew R Helmus; William K Cornwell; Helene Morlon; David D Ackerly; Simon P Blomberg; Campbell O Webb
Journal:  Bioinformatics       Date:  2010-04-15       Impact factor: 6.937

3.  Effect of pH on isolation and distribution of members of subdivision 1 of the phylum Acidobacteria occurring in soil.

Authors:  Michelle Sait; Kathryn E R Davis; Peter H Janssen
Journal:  Appl Environ Microbiol       Date:  2006-03       Impact factor: 4.792

4.  Toward an ecological classification of soil bacteria.

Authors:  Noah Fierer; Mark A Bradford; Robert B Jackson
Journal:  Ecology       Date:  2007-06       Impact factor: 5.499

5.  Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities.

Authors:  Patrick D Schloss; Sarah L Westcott; Thomas Ryabin; Justine R Hall; Martin Hartmann; Emily B Hollister; Ryan A Lesniewski; Brian B Oakley; Donovan H Parks; Courtney J Robinson; Jason W Sahl; Blaz Stres; Gerhard G Thallinger; David J Van Horn; Carolyn F Weber
Journal:  Appl Environ Microbiol       Date:  2009-10-02       Impact factor: 4.792

6.  Accuracy, reproducibility, and interpretation of Fatty Acid methyl ester profiles of model bacterial communities.

Authors:  S K Haack; H Garchow; D A Odelson; L J Forney; M J Klug
Journal:  Appl Environ Microbiol       Date:  1994-07       Impact factor: 4.792

7.  Enhanced summer warming reduces fungal decomposer diversity and litter mass loss more strongly in dry than in wet tundra.

Authors:  Casper T Christiansen; Merian S Haugwitz; Anders Priemé; Cecilie S Nielsen; Bo Elberling; Anders Michelsen; Paul Grogan; Daan Blok
Journal:  Glob Chang Biol       Date:  2016-06-21       Impact factor: 10.863

8.  Prolonged exposure does not increase soil microbial community compositional response to warming along geothermal gradients.

Authors:  Dajana Radujkovic; Erik Verbruggen; Bjarni D Sigurdsson; Niki I W Leblans; Ivan A Janssens; Sara Vicca; James T Weedon
Journal:  FEMS Microbiol Ecol       Date:  2018-02-01       Impact factor: 4.194

9.  Ironing out the wrinkles in the rare biosphere through improved OTU clustering.

Authors:  Susan M Huse; David Mark Welch; Hilary G Morrison; Mitchell L Sogin
Journal:  Environ Microbiol       Date:  2010-03-11       Impact factor: 5.491

10.  Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies.

Authors:  Anna Klindworth; Elmar Pruesse; Timmy Schweer; Jörg Peplies; Christian Quast; Matthias Horn; Frank Oliver Glöckner
Journal:  Nucleic Acids Res       Date:  2012-08-28       Impact factor: 16.971

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