Literature DB >> 30979554

Shear-Induced Migration of a Transmembrane Protein within a Vesicle.

Koyo Nakamura1, Toshihiro Omori2, Takuji Ishikawa1.   

Abstract

Biomembranes feature phospholipid bilayers and serve as the interface between cells or organelles and the extracellular and/or cellular environment. Lipids can move freely throughout the membrane; the lipid bilayer behaves like a fluid. Such fluidity is important in terms of the actions of membrane transport proteins, which often mediate biological functions; membrane protein motion has attracted a great deal of attention. Because the proteins are small, diffusion phenomena are often in play, but flow-induced transport has rarely been addressed. Here, we used a dissipative particle dynamics approach to investigate flow-induced membrane protein transport. We analyzed the drift of a membrane protein located within a vesicle. Under the influence of shear flow, the protein gradually migrated toward the vorticity axis via a random walk, and the probability of retention around the axis was high. To understand the mechanism of protein migration, we varied both shear strength and protein size. Protein migration was induced by the balance between the drag and thermodynamic diffusion forces and could be represented by the Péclet number. These results improve our understanding of flow-induced membrane protein transport.
Copyright © 2019 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2019        PMID: 30979554      PMCID: PMC6486515          DOI: 10.1016/j.bpj.2019.03.017

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

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4.  Three-dimensional vesicles under shear flow: numerical study of dynamics and phase diagram.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-03-30

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Journal:  Nat Rev Neurosci       Date:  2015-02-11       Impact factor: 34.870

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Review 7.  Revisiting the fluid mosaic model of membranes.

Authors:  K Jacobson; E D Sheets; R Simson
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8.  Simulation studies of protein-induced bilayer deformations, and lipid-induced protein tilting, on a mesoscopic model for lipid bilayers with embedded proteins.

Authors:  Maddalena Venturoli; Berend Smit; Maria Maddalena Sperotto
Journal:  Biophys J       Date:  2005-03       Impact factor: 4.033

9.  Curvature-driven molecular demixing in the budding and breakup of mixed component Worm-like Micelles.

Authors:  Sharon M Loverde; Vanessa Ortiz; Randall D Kamien; Michael L Klein; Dennis E Discher
Journal:  Soft Matter       Date:  2010-01-01       Impact factor: 3.679

10.  The epsin protein family: coordinators of endocytosis and signaling.

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Journal:  Biomol Concepts       Date:  2012-04
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  1 in total

1.  Modelling lipid systems in fluid with Lattice Boltzmann Molecular Dynamics simulations and hydrodynamics.

Authors:  Astrid F Brandner; Stepan Timr; Simone Melchionna; Philippe Derreumaux; Marc Baaden; Fabio Sterpone
Journal:  Sci Rep       Date:  2019-11-11       Impact factor: 4.379

  1 in total

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