Literature DB >> 3097515

The ubiquitous potential Z-forming sequence of eucaryotes, (dT-dG)n . (dC-dA)n, is not detectable in the genomes of eubacteria, archaebacteria, or mitochondria.

D S Gross, W T Garrard.   

Abstract

The potential Z-forming sequence (dT-dG)n . (dC-dA)n is an abundant, interspersed repeat element that is ubiquitous in eucaryotic nuclear genomes. We report that in contrast to eucaryotic nuclear DNA, the genomes of eubacteria, archaebacteria, and mitochondria lack this sequence, since even a single tract of greater than or equal to 14 base pairs in length is not detectable through either hybridization or sequence analysis. Interestingly, the phylogenetic distribution of the (dT-dG)n . (dC-dA)n repeat exhibits a striking parallel to that of (dT-dC)n . (dG-dA)n, but not to other homocopolymeric sequences such as (dC-dG)n . (dC-dG)n or (dT-dA)n . (dT-dA)n.

Entities:  

Mesh:

Substances:

Year:  1986        PMID: 3097515      PMCID: PMC367874          DOI: 10.1128/mcb.6.8.3010-3013.1986

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  35 in total

1.  A simple, rapid, and sensitive DNA assay procedure.

Authors:  C Labarca; K Paigen
Journal:  Anal Biochem       Date:  1980-03-01       Impact factor: 3.365

2.  Analysis of restriction fragments of T7 DNA and determination of molecular weights by electrophoresis in neutral and alkaline gels.

Authors:  M W McDonell; M N Simon; F W Studier
Journal:  J Mol Biol       Date:  1977-02-15       Impact factor: 5.469

3.  Homocopolymer sequences in the spacer of a sea urchin histone gene repeat are sensitive to S1 nuclease.

Authors:  C C Hentschel
Journal:  Nature       Date:  1982-02-25       Impact factor: 49.962

4.  A member of a new repeated sequence family which is conserved throughout eucaryotic evolution is found between the human delta and beta globin genes.

Authors:  R Miesfeld; M Krystal; N Arnheim
Journal:  Nucleic Acids Res       Date:  1981-11-25       Impact factor: 16.971

5.  DNA sequence homology and chromosomal deletion at a site of SV40 DNA integration.

Authors:  J R Stringer
Journal:  Nature       Date:  1982-03-25       Impact factor: 49.962

6.  The in-vivo occurrence of Z DNA.

Authors:  D B Haniford; D E Pulleyblank
Journal:  J Biomol Struct Dyn       Date:  1983-12

7.  The phylogeny of prokaryotes.

Authors:  G E Fox; E Stackebrandt; R B Hespell; J Gibson; J Maniloff; T A Dyer; R S Wolfe; W E Balch; R S Tanner; L J Magrum; L B Zablen; R Blakemore; R Gupta; L Bonen; B J Lewis; D A Stahl; K R Luehrsen; K N Chen; C R Woese
Journal:  Science       Date:  1980-07-25       Impact factor: 47.728

8.  Determination of nucleic acid sequence homologies and relative concentrations by a dot hybridization procedure.

Authors:  F C Kafatos; C W Jones; A Efstratiadis
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

9.  The structure of a human alpha-globin pseudogene and its relationship to alpha-globin gene duplication.

Authors:  N J Proudfoot; T Maniatis
Journal:  Cell       Date:  1980-09       Impact factor: 41.582

10.  Human fetal G gamma- and A gamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes.

Authors:  J L Slightom; A E Blechl; O Smithies
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

View more
  17 in total

1.  Polymorphisms in the human X-linked pyruvate dehydrogenase E1 alpha gene.

Authors:  H H Dahl; W M Hutchison; Z Guo; S M Forrest; L L Hansen
Journal:  Hum Genet       Date:  1991-05       Impact factor: 4.132

2.  Distribution of CT-rich tracts is conserved in vertebrate chromosomes.

Authors:  A K Wong; H A Yee; J H van de Sande; J B Rattner
Journal:  Chromosoma       Date:  1990-09       Impact factor: 4.316

Review 3.  Meiotic recombination hotspots: shaping the genome and insights into hypervariable minisatellite DNA change.

Authors:  W P Wahls
Journal:  Curr Top Dev Biol       Date:  1998       Impact factor: 4.897

4.  Hypervariability of simple sequences as a general source for polymorphic DNA markers.

Authors:  D Tautz
Journal:  Nucleic Acids Res       Date:  1989-08-25       Impact factor: 16.971

5.  Molecular cloning of a Drosophila potential Z-DNA forming sequence hybridizing in situ to a developmentally regulated subdivision of the polytene chromosomes.

Authors:  A Jimenez-Ruiz; J M Requena; F Lancillotti; G Morales; M C Lopez; C Alonso
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

6.  Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction.

Authors:  J L Weber; P E May
Journal:  Am J Hum Genet       Date:  1989-03       Impact factor: 11.025

7.  The Z-DNA motif d(TG)30 promotes reception of information during gene conversion events while stimulating homologous recombination in human cells in culture.

Authors:  W P Wahls; L J Wallace; P D Moore
Journal:  Mol Cell Biol       Date:  1990-02       Impact factor: 4.272

8.  Occurrence of potential cruciform and H-DNA forming sequences in genomic DNA.

Authors:  G P Schroth; P S Ho
Journal:  Nucleic Acids Res       Date:  1995-06-11       Impact factor: 16.971

9.  Nonrandom distribution of long mono- and dinucleotide repeats in Drosophila chromosomes: correlations with dosage compensation, heterochromatin, and recombination.

Authors:  K Lowenhaupt; A Rich; M L Pardue
Journal:  Mol Cell Biol       Date:  1989-03       Impact factor: 4.272

10.  Characterization of (GT)n and (CT)n microsatellites in two insect species: Apis mellifera and Bombus terrestris.

Authors:  A Estoup; M Solignac; M Harry; J M Cornuet
Journal:  Nucleic Acids Res       Date:  1993-03-25       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.