Literature DB >> 30968896

Computational models explain how copper binding to amyloid-β peptide oligomers enhances oxidative pathways.

Giovanni La Penna1, Mai Suan Li.   

Abstract

Amyloid-β (Aβ) peptides are intrinsically disordered peptides and their aggregation is the major hallmark of Alzheimer's disease (AD) development. The interactions between copper ions and Aβ peptides create catalysts that activate the production of reactive oxygen species in the synaptic region, a reactivity that is strongly related to AD onset. Recent experimental work [Gu et al., Sci. Rep., 2018, 8(1), 16190] confirmed that the oxidative reactivity of Cu-Aβ catalyzes the formation of Tyr-Tyr crosslinks in peptide dimers. This work provides a structural basis to these observations, describing structures of Cu-Aβ dimers that enhance the propagation of the oxidative pathways activated around the Cu center. Among these, the formation of Tyr-Tyr crosslinks becomes more likely when previous crosslinks involve Cu forming bridges between different peptides. Peptides are, therefore, easily assembled into dimers and tetramers, the latter being dimers of dimers. The size of such dimers and tetramers fits with ion mobility mass spectrometry results [Sitkiewicz et al., J. Mol. Biol., 2014, 426(15), 2871].

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Year:  2019        PMID: 30968896     DOI: 10.1039/c9cp00293f

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  8 in total

Review 1.  Polyphenols as Potential Metal Chelation Compounds Against Alzheimer's Disease.

Authors:  Johant Lakey-Beitia; Andrea M Burillo; Giovanni La Penna; Muralidhar L Hegde; K S Rao
Journal:  J Alzheimers Dis       Date:  2021       Impact factor: 4.472

2.  Molecular Insights into the Effect of Metals on Amyloid Aggregation.

Authors:  Yifat Miller
Journal:  Methods Mol Biol       Date:  2022

3.  Aggregates Sealed by Ions.

Authors:  Giovanni La Penna; Silvia Morante
Journal:  Methods Mol Biol       Date:  2022

4.  A computational study of metal ions interaction with amyloid-β 1-42 peptide structure in hyperpyrexia: Implications for Alzheimer disease.

Authors:  Cosmin Stefan Mocanu; Laura Darie-Ion; Brindusa Alina Petre; Vasile Robert Gradinaru; Gabi Drochioiu
Journal:  J King Saud Univ Sci       Date:  2022-06-28

Review 5.  Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.

Authors:  Phuong H Nguyen; Ayyalusamy Ramamoorthy; Bikash R Sahoo; Jie Zheng; Peter Faller; John E Straub; Laura Dominguez; Joan-Emma Shea; Nikolay V Dokholyan; Alfonso De Simone; Buyong Ma; Ruth Nussinov; Saeed Najafi; Son Tung Ngo; Antoine Loquet; Mara Chiricotto; Pritam Ganguly; James McCarty; Mai Suan Li; Carol Hall; Yiming Wang; Yifat Miller; Simone Melchionna; Birgit Habenstein; Stepan Timr; Jiaxing Chen; Brianna Hnath; Birgit Strodel; Rakez Kayed; Sylvain Lesné; Guanghong Wei; Fabio Sterpone; Andrew J Doig; Philippe Derreumaux
Journal:  Chem Rev       Date:  2021-02-05       Impact factor: 60.622

6.  Nanoscopic insights into the surface conformation of neurotoxic amyloid β oligomers.

Authors:  Martina Banchelli; Roberta Cascella; Cristiano D'Andrea; Leszek Cabaj; Iacopo Osticioli; Daniele Ciofini; Mai Suan Li; Krzysztof Skupień; Marella de Angelis; Salvatore Siano; Cristina Cecchi; Roberto Pini; Giovanni La Penna; Fabrizio Chiti; Paolo Matteini
Journal:  RSC Adv       Date:  2020-06-08       Impact factor: 4.036

7.  Probing the Structure of Toxic Amyloid-β Oligomers with Electron Spin Resonance and Molecular Modeling.

Authors:  Martina Banchelli; Roberta Cascella; Cristiano D'Andrea; Giovanni La Penna; Mai Suan Li; Fabrizio Machetti; Paolo Matteini; Silvia Pizzanelli
Journal:  ACS Chem Neurosci       Date:  2021-03-16       Impact factor: 5.780

8.  REMD Simulations of Full-Length Alpha-Synuclein Together with Ligands Reveal Binding Region and Effect on Amyloid Conversion.

Authors:  Pavel I Semenyuk
Journal:  Int J Mol Sci       Date:  2022-09-30       Impact factor: 6.208

  8 in total

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