Literature DB >> 30953740

Regeneration enhancers: Starting a journey to unravel regulatory events in tissue regeneration.

Anjelica M Rodriguez1, Junsu Kang2.   

Abstract

Regeneration, an ability to replace lost body parts, is widespread across animal species. While mammals poorly regenerate most tissues, teleost fish and urodele amphibians possess remarkable regenerative capacity. Earlier work demonstrated that genes driving regeneration are evolutionarily conserved, indicating that a key factor in diverse tissue regeneration is not the presence or absence of regeneration-driving genes but the mechanisms controlling activation of these genes after injury. Thus, understanding the regulatory events of tissue regeneration could provide the means for unlocking latent capacities for tissue regeneration. After injury, cells undergo extensive epigenetic changes to establish new transcriptional programs for tissue regeneration. Gene transcription in eukaryotes is a complicated process that requires specific interactions between trans-acting regulators and cis-regulatory DNA elements. Among cis-regulatory elements, enhancers are essential to control precise gene expression. Recently, multiple regeneration/injury-associated enhancers have been identified in several model organisms. In this review, we highlight recently discovered regeneration/injury enhancers and their specific characteristics. We also discuss how abnormal regulation of regeneration enhancers influences animal development and physiology. Investigation of regeneration enhancers potentially allows us to begin understanding the fundamental biology of tissue regeneration and inspires new solutions for manipulating regenerative ability.
Copyright © 2019. Published by Elsevier Ltd.

Entities:  

Keywords:  Development; Enhancers; Epigenetics; Injury; Regeneration; Transcriptional regulation; Tumor; Wound healing

Mesh:

Year:  2019        PMID: 30953740      PMCID: PMC6783330          DOI: 10.1016/j.semcdb.2019.04.003

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  63 in total

1.  What are super-enhancers?

Authors:  Sebastian Pott; Jason D Lieb
Journal:  Nat Genet       Date:  2015-01       Impact factor: 38.330

Review 2.  The selection and function of cell type-specific enhancers.

Authors:  Sven Heinz; Casey E Romanoski; Christopher Benner; Christopher K Glass
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-04       Impact factor: 94.444

3.  Transit-amplifying cells orchestrate stem cell activity and tissue regeneration.

Authors:  Ya-Chieh Hsu; Lishi Li; Elaine Fuchs
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

4.  Conversion of adult pancreatic alpha-cells to beta-cells after extreme beta-cell loss.

Authors:  Fabrizio Thorel; Virginie Népote; Isabelle Avril; Kenji Kohno; Renaud Desgraz; Simona Chera; Pedro L Herrera
Journal:  Nature       Date:  2010-04-04       Impact factor: 49.962

5.  Cells keep a memory of their tissue origin during axolotl limb regeneration.

Authors:  Martin Kragl; Dunja Knapp; Eugen Nacu; Shahryar Khattak; Malcolm Maden; Hans Henning Epperlein; Elly M Tanaka
Journal:  Nature       Date:  2009-07-02       Impact factor: 49.962

Review 6.  Mechanisms of erythrocyte development and regeneration: implications for regenerative medicine and beyond.

Authors:  Emery H Bresnick; Kyle J Hewitt; Charu Mehta; Sunduz Keles; Robert F Paulson; Kirby D Johnson
Journal:  Development       Date:  2018-01-10       Impact factor: 6.868

7.  A distinct regulatory region of the Bmp5 locus activates gene expression following adult bone fracture or soft tissue injury.

Authors:  Catherine A Guenther; Zhen Wang; Emma Li; Misha C Tran; Catriona Y Logan; Roel Nusse; Luiz Pantalena-Filho; George P Yang; David M Kingsley
Journal:  Bone       Date:  2015-04-14       Impact factor: 4.398

Review 8.  The repair Schwann cell and its function in regenerating nerves.

Authors:  K R Jessen; R Mirsky
Journal:  J Physiol       Date:  2016-03-21       Impact factor: 5.182

9.  Analysis of chromatin accessibility in human epidermis identifies putative barrier dysfunction-sensing enhancers.

Authors:  Julie M Lander; Dorothy M Supp; Hua He; Lisa J Martin; Xiaoting Chen; Matthew T Weirauch; Steven T Boyce; Raphael Kopan
Journal:  PLoS One       Date:  2017-09-27       Impact factor: 3.240

10.  Localized epigenetic silencing of a damage-activated WNT enhancer limits regeneration in mature Drosophila imaginal discs.

Authors:  Robin E Harris; Linda Setiawan; Josh Saul; Iswar K Hariharan
Journal:  Elife       Date:  2016-02-03       Impact factor: 8.140

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  7 in total

1.  Characterization of mouse Bmp5 regulatory injury element in zebrafish wound models.

Authors:  Ian S Heller; Catherine A Guenther; Ana M Meireles; William S Talbot; David M Kingsley
Journal:  Bone       Date:  2021-11-23       Impact factor: 4.398

2.  Enhancer decommissioning imposes an epigenetic barrier to sensory hair cell regeneration.

Authors:  Litao Tao; Haoze V Yu; Juan Llamas; Talon Trecek; Xizi Wang; Zlatka Stojanova; Andrew K Groves; Neil Segil
Journal:  Dev Cell       Date:  2021-07-30       Impact factor: 13.417

3.  Decoding an organ regeneration switch by dissecting cardiac regeneration enhancers.

Authors:  Ian J Begeman; Kwangdeok Shin; Daniel Osorio-Méndez; Andrew Kurth; Nutishia Lee; Trevor J Chamberlain; Francisco J Pelegri; Junsu Kang
Journal:  Development       Date:  2020-12-23       Impact factor: 6.862

4.  Regeneration of the larval sea star nervous system by wounding induced respecification to the Sox2 lineage.

Authors:  Minyan Zheng; Olga Zueva; Veronica F Hinman
Journal:  Elife       Date:  2022-01-14       Impact factor: 8.140

5.  A regulatory network of Sox and Six transcription factors initiate a cell fate transformation during hearing regeneration in adult zebrafish.

Authors:  Erin Jimenez; Claire C Slevin; Wei Song; Zelin Chen; Stephen C Frederickson; Derek Gildea; Weiwei Wu; Abdel G Elkahloun; Ivan Ovcharenko; Shawn M Burgess
Journal:  Cell Genom       Date:  2022-08-22

Review 6.  Regeneration enhancers: A clue to reactivation of developmental genes.

Authors:  Nanoka Suzuki; Haruki Ochi
Journal:  Dev Growth Differ       Date:  2020-02-25       Impact factor: 2.053

Review 7.  Principles and requirements for stroke recovery science.

Authors:  Clemens J Sommer; Wolf-Rüdiger Schäbitz
Journal:  J Cereb Blood Flow Metab       Date:  2020-11-11       Impact factor: 6.200

  7 in total

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