Literature DB >> 30946990

Circular RNAs in myogenesis.

Arundhati Das1, Aniruddha Das1, Debojyoti Das1, Kotb Abdelmohsen2, Amaresh C Panda3.   

Abstract

Skeletal muscles have an immense ability to regenerate from the muscle stem cells called satellite cells. The process of skeletal muscle regeneration is called myogenesis, which starts with activation of quiescent satellite cells immediately after muscle injury followed by proliferation and fusion of myoblasts into myotubes. Myogenesis is orchestrated through the expression of a specific set of genes which, at each step regulated by complex gene regulatory networks. Besides the well-established roles of transcription factors, increasing evidence demonstrated that circular (circ)RNAs modulate gene expression during myogenesis and are involved in muscle-related diseases. Here we review the recent findings of circRNAs involved in myogenesis.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Backsplicing; Skeletal muscle; circRNA; miRNA sponge

Mesh:

Substances:

Year:  2019        PMID: 30946990      PMCID: PMC6773529          DOI: 10.1016/j.bbagrm.2019.02.011

Source DB:  PubMed          Journal:  Biochim Biophys Acta Gene Regul Mech        ISSN: 1874-9399            Impact factor:   4.490


  76 in total

1.  Group I permuted intron-exon (PIE) sequences self-splice to produce circular exons.

Authors:  M Puttaraju; M D Been
Journal:  Nucleic Acids Res       Date:  1992-10-25       Impact factor: 16.971

2.  Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.

Authors:  Andranik Ivanov; Sebastian Memczak; Emanuel Wyler; Francesca Torti; Hagit T Porath; Marta R Orejuela; Michael Piechotta; Erez Y Levanon; Markus Landthaler; Christoph Dieterich; Nikolaus Rajewsky
Journal:  Cell Rep       Date:  2014-12-31       Impact factor: 9.423

Review 3.  Regulation of circRNA biogenesis.

Authors:  Ling-Ling Chen; Li Yang
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

Review 4.  Satellite cells and the muscle stem cell niche.

Authors:  Hang Yin; Feodor Price; Michael A Rudnicki
Journal:  Physiol Rev       Date:  2013-01       Impact factor: 37.312

Review 5.  Gene regulatory networks and transcriptional mechanisms that control myogenesis.

Authors:  Margaret Buckingham; Peter W J Rigby
Journal:  Dev Cell       Date:  2014-02-10       Impact factor: 12.270

6.  Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral Infection.

Authors:  Xiang Li; Chu-Xiao Liu; Wei Xue; Yang Zhang; Shan Jiang; Qing-Fei Yin; Jia Wei; Run-Wen Yao; Li Yang; Ling-Ling Chen
Journal:  Mol Cell       Date:  2017-06-15       Impact factor: 17.970

7.  CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs.

Authors:  Dawood B Dudekula; Amaresh C Panda; Ioannis Grammatikakis; Supriyo De; Kotb Abdelmohsen; Myriam Gorospe
Journal:  RNA Biol       Date:  2016       Impact factor: 4.652

8.  Genome-wide analysis of circular RNAs in prenatal and postnatal muscle of sheep.

Authors:  Cunyuan Li; Xiaoyue Li; Yang Yao; Qiman Ma; Wei Ni; Xiangyu Zhang; Yang Cao; Wureli Hazi; Dawei Wang; Renzhe Quan; Xiaoxu Hou; Zhijin Liu; Qianqian Zhan; Li Liu; Mengdan Zhang; Shuting Yu; Shengwei Hu
Journal:  Oncotarget       Date:  2017-10-12

9.  circRNADb: A comprehensive database for human circular RNAs with protein-coding annotations.

Authors:  Xiaoping Chen; Ping Han; Tao Zhou; Xuejiang Guo; Xiaofeng Song; Yan Li
Journal:  Sci Rep       Date:  2016-10-11       Impact factor: 4.379

10.  Circular transcripts of the testis-determining gene Sry in adult mouse testis.

Authors:  B Capel; A Swain; S Nicolis; A Hacker; M Walter; P Koopman; P Goodfellow; R Lovell-Badge
Journal:  Cell       Date:  1993-06-04       Impact factor: 41.582

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  15 in total

Review 1.  Regulation of Non-Coding RNA in the Growth and Development of Skeletal Muscle in Domestic Chickens.

Authors:  Hongmei Shi; Yang He; Xuzhen Li; Yanli Du; Jinbo Zhao; Changrong Ge
Journal:  Genes (Basel)       Date:  2022-06-09       Impact factor: 4.141

2.  Cancer-Associated circRNA-miRNA-mRNA Regulatory Networks: A Meta-Analysis.

Authors:  Shaheerah Khan; Atimukta Jha; Amaresh C Panda; Anshuman Dixit
Journal:  Front Mol Biosci       Date:  2021-05-12

3.  Identification of crucial circRNAs in skeletal muscle during chicken embryonic development.

Authors:  Pengfei Wu; Kaizhi Zhou; Jin Zhang; Xuanze Ling; Xinchao Zhang; Li Zhang; Peifeng Li; Qingyu Wei; Tao Zhang; Xinglong Wang; Genxi Zhang
Journal:  BMC Genomics       Date:  2022-04-28       Impact factor: 4.547

4.  Identification and Characterization of Circular Intronic RNAs Derived from Insulin Gene.

Authors:  Debojyoti Das; Aniruddha Das; Mousumi Sahu; Smruti Sambhav Mishra; Shaheerah Khan; Pruthvi R Bejugam; Pranita K Rout; Arundhati Das; Shehnaz Bano; Gyan Prakash Mishra; Sunil K Raghav; Anshuman Dixit; Amaresh C Panda
Journal:  Int J Mol Sci       Date:  2020-06-17       Impact factor: 5.923

Review 5.  Circular RNA Regulation of Myogenesis.

Authors:  Pengpeng Zhang; Zhe Chao; Rui Zhang; Ruoqi Ding; Yaling Wang; Wei Wu; Qiu Han; Cencen Li; Haixia Xu; Lei Wang; Yongjie Xu
Journal:  Cells       Date:  2019-08-13       Impact factor: 6.600

6.  Long Non-coding RNA Maternally Expressed 3 Increases the Expression of Neuron-Specific Genes by Targeting miR-128-3p in All-Trans Retinoic Acid-Induced Neurogenic Differentiation From Amniotic Epithelial Cells.

Authors:  Yuhua Gao; Ranxi Zhang; Guanghe Wei; Shanshan Dai; Xue Zhang; Wancai Yang; Xiangchen Li; Chunyu Bai
Journal:  Front Cell Dev Biol       Date:  2019-12-23

Review 7.  Functional Role of circRNAs in the Regulation of Fetal Development, Muscle Development, and Lactation in Livestock.

Authors:  Tianle He; Qingyun Chen; Ke Tian; Yinzhao Xia; Guozhong Dong; Zhenguo Yang
Journal:  Biomed Res Int       Date:  2021-02-19       Impact factor: 3.411

8.  Comprehensive analysis of differentially expressed circRNAs and ceRNA regulatory network in porcine skeletal muscle.

Authors:  Meng Li; Na Zhang; Wanfeng Zhang; Wei Hei; Chunbo Cai; Yang Yang; Chang Lu; Pengfei Gao; Xiaohong Guo; Guoqing Cao; Bugao Li
Journal:  BMC Genomics       Date:  2021-05-01       Impact factor: 4.547

9.  Circular RNA circMYBPC1 promotes skeletal muscle differentiation by targeting MyHC.

Authors:  Mengjie Chen; Xuefeng Wei; Mingming Song; Rui Jiang; Kongwei Huang; Yanfei Deng; Qingyou Liu; Deshun Shi; Hui Li
Journal:  Mol Ther Nucleic Acids       Date:  2021-03-16       Impact factor: 8.886

Review 10.  Seeing Is Believing: Visualizing Circular RNAs.

Authors:  Pruthvi Raj Bejugam; Aniruddha Das; Amaresh Chandra Panda
Journal:  Noncoding RNA       Date:  2020-11-11
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