| Literature DB >> 30944187 |
Bouchra Serhir1, Céline Desjardins2, Florence Doualla-Bell2, Marc Simard3, Cécile Tremblay4, Jean Longtin2,5.
Abstract
The rapid confirmatory Bio-Rad Geenius HIV 1/2 assay was evaluated as an alternative to the HIV-1 Western blot (WB) confirmatory assay. A total of 370 retrospective samples collected from 356 patients were tested. Sensitivity of the Geenius assay to detect HIV-1 and HIV-2 infections was 100% and 97%, respectively, and that of the WB assay was 86% and 39%, respectively. Geenius reduced the number of indeterminate results by 85% and exhibited a differentiation capacity for HIV-1 and HIV-2 of 100% and 89%, respectively. Three of 10 patients presenting with an early HIV infection (1 to 2 weeks before seroconversion by WB) were positive using Geenius. None of the HIV-negative samples were positive using Geenius or WB. However, 7% and 10% of them were indeterminate with Geenius and WB, respectively, leading to a specificity rate of 93% for Geenius and 90% for WB. Ninety cadaveric samples (54 negative, 23 HIV-1 positive, and 3 HIV-1 indeterminate) were tested with Geenius, leading to a sensitivity of 100%, a specificity of 96%, and an indeterminate rate of 4%. Our results indicate that the Bio-Rad Geenius HIV 1/2 rapid test exhibits better sensitivity to detect HIV-1 infections and better performance than WB to confirm and differentiate between HIV-1 and HIV-2 infections. The performance of this new confirmatory assay to detect early infections, to reduce the rate of indeterminate status, and to confirm HIV-1 infection in cadaveric blood samples makes Geenius a potent reliable alternative to the WB.Entities:
Keywords: Geenius; HIV; cadaveric; confirmation
Mesh:
Substances:
Year: 2019 PMID: 30944187 PMCID: PMC6535609 DOI: 10.1128/JCM.01398-18
Source DB: PubMed Journal: J Clin Microbiol ISSN: 0095-1137 Impact factor: 5.948
Performance characteristics of Geenius and Western blot by testing serum samples
| HIV serum parameter | Geenius | WB | |
|---|---|---|---|
| HIV negative panel ( | |||
| No. correctly identified/total no. | 53/57 | 51/57 | |
| No. indeterminate/total no. | 4/57 | 6/57 | |
| Specificity (%) | 93 | 90 | 0.6875 |
| Indeterminate rate (%) | 7 | 10 | |
| HIV-1 positive panel ( | |||
| No. correctly identified/total no. | 58/58 | 50/58 | |
| No. indeterminate/total no. | 0/58 | 8/58 | |
| Sensitivity (%) | 100 | 86 | NA |
| Indeterminate rate (%) | 0 | 14 | |
| HIV-2 positive panel ( | |||
| No. correctly identified/total no. | 32/36 | NA | |
| No. untypeable/total no. | 3/36 | 14/36 | |
| No. indeterminate/total no. | 1/36 | 22/36 | |
| Sensitivity (%) | 97 | 39 | <0.0001 |
| Differentiation capacity (%) | 89 | NA | |
| Indeterminate rate (%) | 3 | 61 | |
| HIV Inno-Lia untypeable panel ( | |||
| No. correctly identified HIV-1/total no. | 7/9 | NA | |
| No. correctly identified HIV-2/total no. | 2/9 | NA | |
| No. indeterminate/total no. | 0/9 | 9/9 | |
| Sensitivity (%) | 100 | NA | |
| WB/Inno-Lia indeterminate status ( | |||
| HIV-1 | 11 | NA | |
| Indeterminate | 13/110 | 110/110 | NA |
| Negative | 86/110 | NA |
Patients presenting with discordant results (described in Table 2).
McNemar's exact test may not be performed when one of the two assays presents only one result. NA, not applicable.
Investigation of discordant results between Geenius, WB, and Inno-Lia
| Patient no. | Specimen no. | Assay S/CO by generation | P24 Ag | Assay finding | ||||
|---|---|---|---|---|---|---|---|---|
| 3rd | 4th | WB | Inno-Lia | Geenius | Comment(s) | |||
| 1 | 1 | 24.80 | 216 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, gp41) | Pos viral load (primary infection) |
| 2 | 1 | 1.50 | 21.91 | Neg | Ind (gp160, gp120) | Ind (gp41) | HIV-1 pos (gp160, gp41) | Pos viral load (primary infection) |
| 3 | 1 | 15.60 | 35.50 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1-pos known patient |
| 4 | 1 | 1.56 | 42.90 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, p31, gp41) | Pos viral load (primary infection) |
| 5 | 1 | 13.20 | 55.63 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1 RNA not detected |
| 6 | 1 | 13.11 | 459 | Neg | Ind (p24) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1-pos known patient |
| 7 | 1 | 13.50 | 85.58 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1-pos known patient |
| 8 | 1 | Neg | 1.14 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1 RNA not detected |
| 9 | 1 | 14.20 | 7.04 | Neg | Ind (gp41) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1 RNA not detected |
| 10 | 1 | 14.90 | 11.86 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1 positive known patient |
| 11 | 1 | 13.80 | 22.06 | Neg | Ind (gp160) | Ind (gp41) | HIV-1 pos (gp160, gp41) | HIV-1-pos known patient |
| 12 | 1 | Neg | Ind (p65, p55, p40, p31, p24, p18) | HIV-2 pos (p24, p17, sgp105, gp36) | HIV-2 ind (gp160, gp41) | HIV-2 RNA not available | ||
| 2 | Neg | Ind (p65, p55, p40, p31, p24, p18) | HIV-2 pos (p24, Spg105, gp36) | HIV-2 pos (gp36, gp41, gp140) | HIV-2 RNA not available | |||
| 13 | 1 | Neg | Ind (p24) | HIV-1 pos (gp41, p24) | Neg | HIV-1 RNA not available | ||
| 2 | Neg | Ind (p24) | HIV-1 pos (gp41, p24) | Ind (gp41) | HIV-1 RNA not available | |||
| 3 | Neg | Ind (p24) | HIV-1 pos (gp41, p24) | Ind (gp41) | HIV-1 RNA not available | |||
| 4 | Neg | Ind (p24) | Ind (p24) | Neg | HIV-1 RNA not available | |||
Abbreviations: S/CO, signal to cutoff; Ag, antigen; Neg, negative; Ind, indeterminate; Pos, positive.
Performance characteristics of Geenius in confirming HIV-1 infection in cadaveric samples
| HIV cadaveric sample parameter (panel 7) | Geenius result |
|---|---|
| HIV negative ( | |
| No. correctly identified/total no. | 52/54 |
| No. HIV-1 indeterminate/total no. | 1/54 |
| No. HIV-2 indeterminate/total no. | 1/54 |
| Specificity (%) | 96 |
| Indeterminate rate (%) | 4 |
| HIV positive ( | |
| No. correctly identified/total no. | 23/23 |
| Sensitivity (%) | 100 |
| HIV-1 indeterminate ( | |
| Negative | 3/3 |