Literature DB >> 30940283

Guidelines for Validation of Qualitative Real-Time PCR Methods for Molecular Diagnostic Identification of Probiotics.

Hanan R Shehata1, Subramanyam Ragupathy1, Dhivya Shanmughanandhan1, Prasad Kesanakurti1, Teri M Ehlinger2, Steven G Newmaster1.   

Abstract

Backgroud: Probiotics have been shown to benefit human health through several mechanisms, including their role in improving the health of our gastrointestinal tracts. The health benefits of probiotics are strain specific, and therefore it is critical to include the correct strains in probiotic products when claiming specific health benefits. Several studies have reported issues concerning the accuracy of labeling of commercial probiotic products, including inaccurate taxonomy, missing species, or undeclared species. Consequently, there is a growing need to develop and validate assays to reliably verify strain identity in commercial probiotic products. PCR-based methods are the most commonly used methods for food species ingredient diagnostics because they are simple, fast, sensitive, and can be validated. Objective: The aim of this paper is to set the guidelines for validating targeted qualitative real-time PCR assays to verify the presence of specific strains in a probiotic supplement. Methods and
Results: Qualitative real-time PCR assays are validated to evaluate the assay performance in terms of specificity, sensitivity, repeatability, and reproducibility in detecting target strains. Conclusions and Highlights: Setting these guidelines will facilitate and streamline the validation process for qualitative real-time PCR-based assays for probiotic identity authentication in support of quality assurance systems.

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Mesh:

Year:  2019        PMID: 30940283     DOI: 10.5740/jaoacint.18-0320

Source DB:  PubMed          Journal:  J AOAC Int        ISSN: 1060-3271            Impact factor:   1.913


  8 in total

1.  Enumeration of Probiotic Strain Lacticaseibacillus rhamnosus GG (ATCC 53103) Using Viability Real-time PCR.

Authors:  Hanan R Shehata; Steven G Newmaster
Journal:  Probiotics Antimicrob Proteins       Date:  2021-09-30       Impact factor: 4.609

2.  A qRT-PCR Method Capable of Quantifying Specific Microorganisms Compared to NGS-Based Metagenome Profiling Data.

Authors:  Jinuk Jeong; Seyoung Mun; Yunseok Oh; Chun-Sung Cho; Kyeongeui Yun; Yongju Ahn; Won-Hyong Chung; Mi Young Lim; Kyung Eun Lee; Tae Soon Hwang; Kyudong Han
Journal:  Microorganisms       Date:  2022-01-30

Review 3.  How to Improve Health with Biological Agents-Narrative Review.

Authors:  Anna Zawistowska-Rojek; Stefan Tyski
Journal:  Nutrients       Date:  2022-04-20       Impact factor: 6.706

4.  Real-Time PCR Assays for the Specific Identification of Probiotic Strains Lactobacillus gasseri BNR17 and Lactobacillus reuteri LRC (NCIMB 30242).

Authors:  Hanan R Shehata; Subramanyam Ragupathy; Shara Allen; Gregory Leyer; Steven G Newmaster
Journal:  Probiotics Antimicrob Proteins       Date:  2021-06       Impact factor: 4.609

5.  Antimicrobial Efficacy of a Novel Antibiotic-Eluting Injectable Platelet-Rich Fibrin Scaffold against a Dual-Species Biofilm in an Infected Immature Root Canal Model.

Authors:  Azade Rafiee; Mahtab Memarpour; Yasaman Najibi; Bahman Khalvati; Sedigheh Kianpour; Mohammad Hossein Morowvat
Journal:  Biomed Res Int       Date:  2020-12-08       Impact factor: 3.411

6.  Locked Nucleic Acid Hydrolysis Probes for the Specific Identification of Probiotic Strains Bifidobacterium animalis subsp. lactis DSM 15954 and Bi-07™.

Authors:  Hanan R Shehata; Anthony Kiefer; Wesley Morovic; Steven G Newmaster
Journal:  Front Microbiol       Date:  2021-12-23       Impact factor: 5.640

7.  A Multiplex Real-Time Reverse Transcription Polymerase Chain Reaction Assay With Enhanced Capacity to Detect Vesicular Stomatitis Viral Lineages of Central American Origin.

Authors:  Kate Hole; Charles Nfon; Luis L Rodriguez; Lauro Velazquez-Salinas
Journal:  Front Vet Sci       Date:  2021-12-20

8.  Liquid profiling of circulating tumor DNA in colorectal cancer: steps needed to achieve its full clinical value as standard care.

Authors:  Maren Hedtke; Rodrigo Pessoa Rejas; Matthias F Froelich; Volker Ast; Angelika Duda; Laura Mirbach; Victor Costina; Uwe M Martens; Ralf-Dieter Hofheinz; Michael Neumaier; Verena Haselmann
Journal:  Mol Oncol       Date:  2021-12-20       Impact factor: 7.449

  8 in total

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