Literature DB >> 30927494

Broadening the Scope of Enforced ATP Wasting as a Tool for Metabolic Engineering in Escherichia coli.

Simon Boecker1, Ahmed Zahoor1, Thorben Schramm2, Hannes Link2, Steffen Klamt1.   

Abstract

The targeted increase of cellular adenosine triphosphate (ATP) turnover (enforced ATP wasting) has recently been recognized as a promising tool for metabolic engineering when product synthesis is coupled with net ATP formation. The goal of the present study is to further examine and to further develop the concept of enforced ATP wasting and to broaden its scope for potential applications. In particular, considering the fermentation products synthesized by Escherichia coli under anaerobic conditions as a proxy for target chemical(s), i) a new genetic module for dynamic and gradual induction of the F1 -part of the ATPase is developed and it is found that ii) induction of the ATPase leads to higher metabolic activity and increased product formation in E. coli under anaerobic conditions, and that iii) ATP wasting significantly increases substrate uptake and productivity of growth-arrested cells, which is vital for its use in two-stage processes. To the best of the authors' knowledge, the glucose uptake rate of 6.49 mmol gCDW-1  h-1 achieved with enforced ATP wasting is the highest value reported for nongrowing E. coli cells. In summary, this study shows that enforced ATP wasting can be used to improve yield and titer (in growth-coupled processes) as well as volumetric productivity (in two-stage processes) depending on which of the performance measures is more crucial for the process and product of interest.
© 2019 The Authors. Biotechnology Journal Published by Wiley-VCH Verlag GmbH & Co. KGaA Weinheim.

Entities:  

Keywords:  ATP wasting; ATPase; Escherichia coli; metabolic engineering; nitrogen starvation; one-stage fermentation; two-stage fermentation

Mesh:

Substances:

Year:  2019        PMID: 30927494     DOI: 10.1002/biot.201800438

Source DB:  PubMed          Journal:  Biotechnol J        ISSN: 1860-6768            Impact factor:   4.677


  5 in total

1.  Automatic construction of metabolic models with enzyme constraints.

Authors:  Pavlos Stephanos Bekiaris; Steffen Klamt
Journal:  BMC Bioinformatics       Date:  2020-01-14       Impact factor: 3.169

2.  An extended and generalized framework for the calculation of metabolic intervention strategies based on minimal cut sets.

Authors:  Philipp Schneider; Axel von Kamp; Steffen Klamt
Journal:  PLoS Comput Biol       Date:  2020-07-27       Impact factor: 4.475

3.  Engineering Escherichia coli for efficient aerobic conversion of glucose to fumaric acid.

Authors:  Alexandra Yu Skorokhodova; Andrey Yu Gulevich; Vladimir G Debabov
Journal:  Biotechnol Rep (Amst)       Date:  2022-01-17

4.  Deciphering the physiological response of Escherichia coli under high ATP demand.

Authors:  Simon Boecker; Giulia Slaviero; Thorben Schramm; Witold Szymanski; Ralf Steuer; Hannes Link; Steffen Klamt
Journal:  Mol Syst Biol       Date:  2021-12       Impact factor: 11.429

5.  Environment Constrains Fitness Advantages of Division of Labor in Microbial Consortia Engineered for Metabolite Push or Pull Interactions.

Authors:  Ashley E Beck; Kathryn Pintar; Diana Schepens; Ashley Schrammeck; Timothy Johnson; Alissa Bleem; Martina Du; William R Harcombe; Hans C Bernstein; Jeffrey J Heys; Tomas Gedeon; Ross P Carlson
Journal:  mSystems       Date:  2022-06-28       Impact factor: 7.324

  5 in total

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