Literature DB >> 30925230

A Genetic Risk Score Associated with Chronic Obstructive Pulmonary Disease Susceptibility and Lung Structure on Computed Tomography.

Elizabeth C Oelsner1, Victor E Ortega2, Benjamin M Smith1, Jennifer N Nguyen3, Ani W Manichaikul3, Eric A Hoffman4,5,6, Xiuqing Guo7, Kent D Taylor7, Prescott G Woodruff8, David J Couper9, Nadia N Hansel10, Fernando J Martinez11, Robert Paine12, Meilan K Han13, Christopher Cooper5,14, Mark T Dransfield15, Gerard Criner16, Jerry A Krishnan17, Russell Bowler18, Eugene R Bleecker19, Stephen Peters2, Stephen S Rich3, Deborah A Meyers19, Jerome I Rotter7, R Graham Barr1.   

Abstract

Rationale: Chronic obstructive pulmonary disease (COPD) has been associated with numerous genetic variants, yet the extent to which its genetic risk is mediated by variation in lung structure remains unknown.
Objectives: To characterize associations between a genetic risk score (GRS) associated with COPD susceptibility and lung structure on computed tomography (CT).
Methods: We analyzed data from MESA Lung (Multi-Ethnic Study of Atherosclerosis Lung Study), a U.S. general population-based cohort, and SPIROMICS (Subpopulations and Intermediate Outcome Measures in COPD Study). A weighted GRS was calculated from 83 SNPs that were previously associated with lung function. Lung density, spatially matched airway dimensions, and airway counts were assessed on full-lung CT. Generalized linear models were adjusted for age, age squared, sex, height, principal components of genetic ancestry, smoking status, pack-years, CT model, milliamperes, and total lung volume.Measurements and Main
Results: MESA Lung and SPIROMICS contributed 2,517 and 2,339 participants, respectively. Higher GRS was associated with lower lung function and increased COPD risk, as well as lower lung density, smaller airway lumens, and fewer small airways, without effect modification by smoking. Adjustment for CT lung structure, particularly small airway measures, attenuated associations between the GRS and FEV1/FVC by 100% and 60% in MESA and SPIROMICS, respectively. Lung structure (P < 0.0001), but not the GRS (P > 0.10), improved discrimination of moderate-to-severe COPD cases relative to clinical factors alone.Conclusions: A GRS associated with COPD susceptibility was associated with CT lung structure. Lung structure may be an important mediator of heritability and determinant of personalized COPD risk.

Entities:  

Keywords:  airway remodeling; emphysema; spirometry

Mesh:

Year:  2019        PMID: 30925230      PMCID: PMC6775892          DOI: 10.1164/rccm.201812-2355OC

Source DB:  PubMed          Journal:  Am J Respir Crit Care Med        ISSN: 1073-449X            Impact factor:   21.405


  57 in total

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Authors:  M R Miller; J Hankinson; V Brusasco; F Burgos; R Casaburi; A Coates; R Crapo; P Enright; C P M van der Grinten; P Gustafsson; R Jensen; D C Johnson; N MacIntyre; R McKay; D Navajas; O F Pedersen; R Pellegrino; G Viegi; J Wanger
Journal:  Eur Respir J       Date:  2005-08       Impact factor: 16.671

2.  Patterns of Growth and Decline in Lung Function in Persistent Childhood Asthma.

Authors:  M J McGeachie; K P Yates; S T Weiss; R C Strunk; X Zhou; F Guo; A L Sternberg; M L Van Natta; R A Wise; S J Szefler; S Sharma; A T Kho; M H Cho; D C Croteau-Chonka; P J Castaldi; G Jain; A Sanyal; Y Zhan; B R Lajoie; J Dekker; J Stamatoyannopoulos; R A Covar; R S Zeiger; N F Adkinson; P V Williams; H W Kelly; H Grasemann; J M Vonk; G H Koppelman; D S Postma; B A Raby; I Houston; Q Lu; A L Fuhlbrigge; K G Tantisira; E K Silverman; J Tonascia
Journal:  N Engl J Med       Date:  2016-05-12       Impact factor: 91.245

3.  Comparison of computed density and macroscopic morphometry in pulmonary emphysema.

Authors:  P A Gevenois; V de Maertelaer; P De Vuyst; J Zanen; J C Yernault
Journal:  Am J Respir Crit Care Med       Date:  1995-08       Impact factor: 21.405

4.  Cigarette smoking and airway wall thickness on CT scan in a multi-ethnic cohort: the MESA Lung Study.

Authors:  Kathleen M Donohue; Eric A Hoffman; Heather Baumhauer; Junfeng Guo; Matthew Budoff; John H M Austin; Ravi Kalhan; Steven Kawut; Russell Tracy; R Graham Barr
Journal:  Respir Med       Date:  2012-09-10       Impact factor: 3.415

5.  Genetic ancestry and the relationship of cigarette smoking to lung function and per cent emphysema in four race/ethnic groups: a cross-sectional study.

Authors:  Rhea Powell; Duncan Davidson; Jasmin Divers; Ani Manichaikul; J Jeffrey Carr; Robert Detrano; Eric A Hoffman; Rui Jiang; Richard A Kronmal; Kiang Liu; Naresh M Punjabi; Eyal Shahar; Karol E Watson; Jerome I Rotter; Kent D Taylor; Stephen S Rich; R Graham Barr
Journal:  Thorax       Date:  2013-04-12       Impact factor: 9.139

6.  Asthma and lung structure on computed tomography: the Multi-Ethnic Study of Atherosclerosis Lung Study.

Authors:  Kathleen M Donohue; Eric A Hoffman; Heather Baumhauer; Junfeng Guo; Firas S Ahmed; Gina S Lovasi; David R Jacobs; Paul Enright; R Graham Barr
Journal:  J Allergy Clin Immunol       Date:  2013-02       Impact factor: 10.793

7.  Reproducibility and validity of lung density measures from cardiac CT Scans--The Multi-Ethnic Study of Atherosclerosis (MESA) Lung Study.

Authors:  Eric A Hoffman; Rui Jiang; Heather Baumhauer; Michael A Brooks; J Jeffrey Carr; Robert Detrano; Joseph Reinhardt; Josanna Rodriguez; Karen Stukovsky; Nathan D Wong; R Graham Barr
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8.  Human airway branch variation and chronic obstructive pulmonary disease.

Authors:  Benjamin M Smith; Hussein Traboulsi; John H M Austin; Ani Manichaikul; Eric A Hoffman; Eugene R Bleecker; Wellington V Cardoso; Christopher Cooper; David J Couper; Stephen M Dashnaw; Jia Guo; MeiLan K Han; Nadia N Hansel; Emlyn W Hughes; David R Jacobs; Richard E Kanner; Joel D Kaufman; Eric Kleerup; Ching-Long Lin; Kiang Liu; Christian M Lo Cascio; Fernando J Martinez; Jennifer N Nguyen; Martin R Prince; Stephen Rennard; Stephen S Rich; Leora Simon; Yanping Sun; Karol E Watson; Prescott G Woodruff; Carolyn J Baglole; R Graham Barr
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-16       Impact factor: 11.205

9.  The nature of small-airway obstruction in chronic obstructive pulmonary disease.

Authors:  James C Hogg; Fanny Chu; Soraya Utokaparch; Ryan Woods; W Mark Elliott; Liliana Buzatu; Ruben M Cherniack; Robert M Rogers; Frank C Sciurba; Harvey O Coxson; Peter D Paré
Journal:  N Engl J Med       Date:  2004-06-24       Impact factor: 91.245

10.  Global, regional, and national age-sex specific mortality for 264 causes of death, 1980-2016: a systematic analysis for the Global Burden of Disease Study 2016.

Authors: 
Journal:  Lancet       Date:  2017-09-16       Impact factor: 79.321

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Authors:  David M Mannino
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Review 2.  Why is Disease Penetration So Variable? Role of Genetic Modifiers of Lung Function in Alpha-1 Antitrypsin Deficiency.

Authors:  Brian D Hobbs; Michael H Cho
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3.  Development of a Blood-based Transcriptional Risk Score for Chronic Obstructive Pulmonary Disease.

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Review 4.  Origins of and lessons from quantitative functional X-ray computed tomography of the lung.

Authors:  Eric A Hoffman
Journal:  Br J Radiol       Date:  2022-03-01       Impact factor: 3.629

5.  Polygenic transcriptome risk scores for COPD and lung function improve cross-ethnic portability of prediction in the NHLBI TOPMed program.

Authors:  Xiaowei Hu; Dandi Qiao; Wonji Kim; Matthew Moll; Pallavi P Balte; Leslie A Lange; Traci M Bartz; Rajesh Kumar; Xingnan Li; Bing Yu; Brian E Cade; Cecelia A Laurie; Tamar Sofer; Ingo Ruczinski; Deborah A Nickerson; Donna M Muzny; Ginger A Metcalf; Harshavardhan Doddapaneni; Stacy Gabriel; Namrata Gupta; Shannon Dugan-Perez; L Adrienne Cupples; Laura R Loehr; Deepti Jain; Jerome I Rotter; James G Wilson; Bruce M Psaty; Myriam Fornage; Alanna C Morrison; Ramachandran S Vasan; George Washko; Stephen S Rich; George T O'Connor; Eugene Bleecker; Robert C Kaplan; Ravi Kalhan; Susan Redline; Sina A Gharib; Deborah Meyers; Victor Ortega; Josée Dupuis; Stephanie J London; Tuuli Lappalainen; Elizabeth C Oelsner; Edwin K Silverman; R Graham Barr; Timothy A Thornton; Heather E Wheeler; Michael H Cho; Hae Kyung Im; Ani Manichaikul
Journal:  Am J Hum Genet       Date:  2022-04-05       Impact factor: 11.043

6.  FSTL-1 Attenuation Causes Spontaneous Smoke-Resistant Pulmonary Emphysema.

Authors:  Matthew Henkel; Jessica Partyka; Alyssa D Gregory; Erick Forno; Michael H Cho; Taylor Eddens; Andrew R Tout; Nathan Salamacha; William Horne; Krithika S Rao; Yijen Wu; John F Alcorn; Dennis Kostka; Raphael Hirsch; Juan C Celedón; Steven D Shapiro; Jay K Kolls; Brian T Campfield
Journal:  Am J Respir Crit Care Med       Date:  2020-04-15       Impact factor: 21.405

7.  Progress and Research Priorities in Imaging Genomics for Heart and Lung Disease: Summary of an NHLBI Workshop.

Authors:  Donna K Arnett; Ramachandran S Vasan; Matthew Nayor; Li Shen; Gary M Hunninghake; Peter Kochunov; R Graham Barr; David A Bluemke; Ulrich Broeckel; Peter Caravan; Susan Cheng; Paul S de Vries; Udo Hoffmann; Márton Kolossváry; Huiqing Li; James Luo; Elizabeth M McNally; George Thanassoulis
Journal:  Circ Cardiovasc Imaging       Date:  2021-08-13       Impact factor: 8.589

8.  Bronchial Variation: Anatomical Abnormality May Predispose Chronic Obstructive Pulmonary Disease.

Authors:  Xian Wen Sun; Ying Ni Lin; Yong Jie Ding; Shi Qi Li; Hong Peng Li; Qing Yun Li
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2021-02-23

9.  Genetics, Chronic Obstructive Pulmonary Disease, and the Arrow of Time.

Authors:  Peter M A Calverley; Paul P Walker
Journal:  Am J Respir Crit Care Med       Date:  2019-09-15       Impact factor: 21.405

10.  Chronic obstructive pulmonary disease and related phenotypes: polygenic risk scores in population-based and case-control cohorts.

Authors:  Matthew Moll; Phuwanat Sakornsakolpat; Nick Shrine; Brian D Hobbs; Dawn L DeMeo; Catherine John; Anna L Guyatt; Michael J McGeachie; Sina A Gharib; Ma'en Obeidat; Lies Lahousse; Sara R A Wijnant; Guy Brusselle; Deborah A Meyers; Eugene R Bleecker; Xingnan Li; Ruth Tal-Singer; Ani Manichaikul; Stephen S Rich; Sungho Won; Woo Jin Kim; Ah Ra Do; George R Washko; R Graham Barr; Bruce M Psaty; Traci M Bartz; Nadia N Hansel; Kathleen Barnes; John E Hokanson; James D Crapo; David Lynch; Per Bakke; Amund Gulsvik; Ian P Hall; Louise Wain; Scott T Weiss; Edwin K Silverman; Frank Dudbridge; Martin D Tobin; Michael H Cho
Journal:  Lancet Respir Med       Date:  2020-07       Impact factor: 102.642

  10 in total

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