Literature DB >> 30877118

Spatial Heterogeneity of Vibrio spp. in Sediments of Chinese Marginal Seas.

Xiaolei Wang1, Jiwen Liu1,2,3, Bei Li1, Jinchang Liang1, Hao Sun1, Shun Zhou1, Xiao-Hua Zhang4,2,3.   

Abstract

Vibrio spp. are ubiquitous marine bacteria with high metabolism flexibility and genome plasticity. Previous studies have revealed the dynamics of planktonic vibrios in relation to environmental forces, such as temperature and salinity. However, little is known about Vibrio ecology in benthic environments. Here, we elucidate the abundance, diversity, and spatial distribution of Vibrio spp. in sediments of the Chinese marginal seas, with a wide spatial range from north to south covering the Yellow Sea (YS), East China Sea (ECS), and South China Sea (SCS). Quantitative analysis showed that Vibrio spp. were most abundant in the SCS (∼9.04 × 105 copies/g) compared to the YS (∼1.00 × 105 copies/g) and ECS (∼8.86 × 105 copies/g). Vibrio community compositions derived from Illumina sequencing of Vibrio-specific 16S rRNA genes varied significantly between sampling areas, which was reflected by a strong distance-decay pattern. The spatial distribution of Vibrio was governed by a joint effect of spatial and environmental factors (especially temperature, salinity, and SiO3 2-), and their respective pure effects explained only a small fraction of the community variation. Moreover, we identified the most prominent operational taxonomic units (OTUs) that were partitioned in these sea areas. Whereas Vibrionaceae OTU20 and Photobacterium lipolyticum were prevalent in the YS, Vibrio gigantis and Photobacterium piscicola, and P. piscicola, Photobacterium lutimaris, and Photobacterium alginatilyticum were prevalent in the ECS and SCS, respectively. Our study demonstrated clear spatial heterogeneity of Vibrio spp. in sediments of the Chinese marginal seas, laying a foundation for fully understanding the marine Vibrio ecology and the ecological roles of the species.IMPORTANCE Vibrio is an important component of natural marine microbial populations in terms of pathogenicity and roles in carbon cycling. Compared to the marine pelagic environment, our knowledge of the diversity and distribution pattern of Vibrio spp. in sediment is limited. Here, we show higher Vibrio abundance in Chinese marginal seas than in other studied sediments. There was a clear spatial differentiation of Vibrio abundance and community composition in different sea areas. The benthic Vibrio community displayed a strong distance-decay pattern across a wide spatial range, which was formed under the combined effects of spatial and environmental factors. These results provide deep insights into the ecological dynamics of Vibrio and its environmental controls, facilitating a more comprehensive understanding of the marine Vibrio ecology.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  Chinese marginal seas; Vibriozzm321990; sediments; spatial heterogeneity

Year:  2019        PMID: 30877118      PMCID: PMC6498182          DOI: 10.1128/AEM.03064-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  66 in total

1.  Survival of Vibrio fluvialis in seawater under starvation conditions.

Authors:  Ben Kahla-Nakbi Amel; Besbes Amine; Bakhrouf Amina
Journal:  Microbiol Res       Date:  2006-07-25       Impact factor: 5.415

2.  The fur gene as a new phylogenetic marker for Vibrionaceae species identification.

Authors:  Henrique Machado; Lone Gram
Journal:  Appl Environ Microbiol       Date:  2015-02-06       Impact factor: 4.792

3.  Shifts in archaeaplankton community structure along ecological gradients of Pearl Estuary.

Authors:  Jiwen Liu; Shaolan Yu; Meixun Zhao; Biyan He; Xiao-Hua Zhang
Journal:  FEMS Microbiol Ecol       Date:  2014-08-28       Impact factor: 4.194

4.  Vibrio Ecology in the Neuse River Estuary, North Carolina, Characterized by Next-Generation Amplicon Sequencing of the Gene Encoding Heat Shock Protein 60 (hsp60).

Authors:  Kelsey J Jesser; Rachel T Noble
Journal:  Appl Environ Microbiol       Date:  2018-06-18       Impact factor: 4.792

5.  Environmental influences on Vibrio populations in northern temperate and boreal coastal waters (Baltic and Skagerrak Seas).

Authors:  Alexander Eiler; Mona Johansson; Stefan Bertilsson
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

6.  Water column dynamics of Vibrio in relation to phytoplankton community composition and environmental conditions in a tropical coastal area.

Authors:  Maria E Asplund; Ann-Sofi Rehnstam-Holm; Vijay Atnur; Pendru Raghunath; Vasudevan Saravanan; Karolina Härnström; Betty Collin; Indrani Karunasagar; Anna Godhe
Journal:  Environ Microbiol       Date:  2011-09-05       Impact factor: 5.491

7.  Characterization of a new endo-type alginate lyase from Vibrio sp. NJU-03.

Authors:  Benwei Zhu; Yun Sun; Fang Ni; Limin Ning; Zhong Yao
Journal:  Int J Biol Macromol       Date:  2017-10-26       Impact factor: 6.953

Review 8.  Abundance and Distribution of Enteric Bacteria and Viruses in Coastal and Estuarine Sediments-a Review.

Authors:  Francis Hassard; Ceri L Gwyther; Kata Farkas; Anthony Andrews; Vera Jones; Brian Cox; Howard Brett; Davey L Jones; James E McDonald; Shelagh K Malham
Journal:  Front Microbiol       Date:  2016-11-01       Impact factor: 5.640

9.  Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Soonjae Kwon; Jeongmin Lim; Yeseul Kim; Hyungseok Seo; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2017-05-30       Impact factor: 2.747

10.  Environmental Controls of Oyster-Pathogenic Vibrio spp. in Oregon Estuaries and a Shellfish Hatchery.

Authors:  Mary R Gradoville; Byron C Crump; Claudia C Häse; Angelicque E White
Journal:  Appl Environ Microbiol       Date:  2018-04-16       Impact factor: 4.792

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