| Literature DB >> 30874616 |
Samuel I Berchuck1, Jean-Claude Mwanza2, Angelo P Tanna3, Donald L Budenz2, Joshua L Warren4.
Abstract
Glaucoma is the leading cause of irreversible blindness worldwide and requires regular monitoring upon diagnosis to ascertain whether the disease is stable or progressing. However, making this determination remains a difficult clinical task. Recently, a novel spatiotemporal boundary detection predictor of glaucomatous visual field (VF) progression (STBound) was developed. In this work, we explore the ability of STBound to differentiate progressing and non-progressing glaucoma patients in comparison to existing methods. STBound, Spatial PROGgression, and traditional trend-based progression methods (global index (GI) regression, mean regression slope, point-wise linear regression, permutation of pointwise linear regression) were applied to longitudinal VF data from 191 eyes of 91 glaucoma patients. The ability of each method to identify progression was compared using Akaike information criterion (AIC), full/partial area under the receiver operating characteristic curve (AUC/pAUC), sensitivity, and specificity. STBound offered improved diagnostic ability (AIC: 197.77 vs. 204.11-217.55; AUC: 0.74 vs. 0.63-0.70) and showed no correlation (r: -0.01-0.11; p-values: 0.11-0.93) with the competing methods. STBound combined with GI (the top performing competitor) provided improved performance over all individual metrics and compared to all metrics combined with GI (all p-values < 0.05). STBound may be a valuable diagnostic tool and can be used in conjunction with existing methods.Entities:
Mesh:
Year: 2019 PMID: 30874616 PMCID: PMC6420602 DOI: 10.1038/s41598-018-37127-z
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Summary of criteria included in each diagnostic method.
| Method | Progression Metric |
|---|---|
| GI | Slope and corresponding p-value from regressing the average (across all VF locations) differential light sensitivity (DLS) from each test across time, and their interaction[ |
| MS | Overall mean slope (MS) of DLS over time for all location specific regression lines with a p-value < 0.01[ |
| P1 | 1st order statistic of slope p-values from the location specific regression[ |
| P2 | 2nd order statistic of slope p-values from the location specific regression[ |
| P3 | 3rd order statistic of slope p-values from the location specific regression[ |
| P4 | 4th order statistic of slope p-values from the location specific regression[ |
| PoPLR | Overall p-value for the negative log sum of the slope p-values from the location specific regressions less than 0.05 based on permutation[ |
| SPROG | The estimated overall slope that describes change in sensitivities over time across the entire VF after fitting a hierarchical Bayesian disease mapping statistical model[ |
| STBound | The posterior mean and standard deviation of the coefficient of variation of the parameter that describes the spatial correlation of the VF data, and their interaction[ |
For each of the metrics, the covariates that are listed are included in a logistic regression model used to predict clinical assessment of progression. The resulting predicted probabilities of progression are used as the progression metric.
Assessing the diagnostic capability of the metrics. Each metric is regressed against the clinical assessment of progression, both with and without the global index (GI).
| Metric | Without GI | With GI | ||||||
|---|---|---|---|---|---|---|---|---|
| AIC | AUC | pAUC | P* | AIC | AUC | pAUC | P† | |
| GI | 204.11 | 0.70 | 0.26 | <0.001 | — | — | — | — |
| MS | 210.46 | 0.64 | 0.24 | <0.001 | 204.49 | 0.70 | 0.31 | 0.203 |
| P1 | 214.16 | 0.64 | 0.13 | 0.002 | 201.50 | 0.74 | 0.28 | 0.032 |
| P2 | 217.55 | 0.64 | 0.26 | 0.014 | 204.52 | 0.71 | 0.26 | 0.207 |
| P3 | 215.13 | 0.63 | 0.19 | 0.004 | 203.43 | 0.72 | 0.27 | 0.102 |
| P4 | 214.12 | 0.65 | 0.18 | 0.002 | 203.32 | 0.71 | 0.28 | 0.095 |
| PoPLR | 212.94 | 0.69 | 0.32 | 0.001 | 206.10 | 0.70 | 0.26 | 0.906 |
| SPROG | 214.84 | 0.67 | 0.15 | 0.003 | 206.11 | 0.70 | 0.26 | 0.953 |
| STBound | 197.77 | 0.74 | 0.31 | <0.001 | 180.41 |
|
| <0.001 |
To compare models, AIC, AUC and pAUC are reported. The pAUC is limited to the clinically relevant range of specificity, 85–100%. Also reported are p-values corresponding to hypothesis tests *for each metric marginally, and †in addition to GI. The bold cell indicates a significant improvement in AUC or pAUC over the GI model at the α = 0.05 level of significance.
Correlation matrix and hypothesis test results for the diagnostic metrics.
| Metric | GI | MS | P1 | P2 | P3 | P4 | PoPLR | SPROG | STBound |
|---|---|---|---|---|---|---|---|---|---|
| GI | — | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 |
|
| MS | 0.55 | — | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 |
|
| P1 | 0.26 | 0.34 | — | <0.01 | <0.01 | <0.01 | <0.01 | 0.05 |
|
| P2 | 0.31 | 0.25 | 0.83 | — | <0.01 | <0.01 | <0.01 | <0.01 |
|
| P3 | 0.33 | 0.21 | 0.72 | 0.92 | — | <0.01 | <0.01 | <0.01 |
|
| P4 | 0.38 | 0.24 | 0.68 | 0.85 | 0.92 | — | <0.01 | <0.01 |
|
| PoPLR | 0.67 | 0.43 | 0.35 | 0.43 | 0.45 | 0.50 | — | <0.01 |
|
| SPROG | 0.57 | 0.32 | 0.14 | 0.27 | 0.26 | 0.28 | 0.81 | — |
|
| STBound |
|
|
|
|
|
|
|
| — |
The estimated Pearson correlations and p-values between the metrics are presented below and above the diagonal, respectively. Bold values indicate that the correlation does not statistically differ from zero at the α = 0.05 level of significance.
Figure 1Receiver operating characteristic (ROC) curves for statistically significant diagnostic metrics.
Figure 2Performance of diagnostic metrics in the initial years from baseline visit, AUC (A) and pAUC (B). Estimates are presented as smooth curves using the LOESS method. The horizontal dashed line indicates the value at which a metric does not contribute any diagnostic information.
Figure 3Demonstrating the performance of sensitivity (A) and specificity (B) in the initial years from baseline visit. Both sensitivity and specificity are obtained by using a clinically motivated threshold defined to maximize sensitivity, while forcing the specificity to be no smaller than 85%. Estimates are presented as smooth curves using the LOESS method.
Figure 4Density estimates of the time of first diagnosis for each model in days from baseline visit along with the mean number of days.