Literature DB >> 30872095

MBIR: A cryo-ET 3D reconstruction method that effectively minimizes missing wedge artifacts and restores missing information.

Rui Yan1, Singanallur V Venkatakrishnan2, Jun Liu3, Charles A Bouman4, Wen Jiang5.   

Abstract

Cryo-Electron Tomography (cryo-ET) has become an essential technique in revealing cellular and macromolecular assembly structures in their native states. However, due to radiation damage and the limited tilt range, cryo-ET suffers from low contrast and missing wedge artifacts, which limits the tomograms to low resolution and hinders further biological interpretation. In this study, we applied the Model-Based Iterative Reconstruction (MBIR) method to obtain tomographic 3D reconstructions of experimental cryo-ET datasets and demonstrated the advantages of MBIR in contrast improvement, missing wedge artifacts reduction, missing information restoration, and subtomogram averaging compared with other reconstruction approaches. Considering the outstanding reconstruction quality, MBIR has a great potential in the determination of high resolution biological structures with cryo-ET.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Contrast improvement; Cryo-ET; Missing information restoration; Missing wedge artifacts reduction; Model-based iterative reconstruction; Subtomogram averaging

Mesh:

Year:  2019        PMID: 30872095      PMCID: PMC6502674          DOI: 10.1016/j.jsb.2019.03.002

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  38 in total

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