Literature DB >> 30868660

Directly Functionalized Cucurbit[7]uril as a Biosensor for the Selective Detection of Protein Interactions by 129 Xe hyperCEST NMR.

Ashley E Truxal1, Liping Cao2, Lyle Isaacs3, David E Wemmer1, Alexander Pines1.   

Abstract

Advancement of hyperpolarized 129 Xe MRI technology toward clinical settings demonstrates the considerable interest in this modality for diagnostic imaging. The number of contrast agents, termed biosensors, for 129 Xe MRI that respond to specific biological targets, has grown and diversified. Directly functionalized xenon-carrying macrocycles, such as the large family of cryptophane-based biosensors, are good for localization-based imaging and provide contrast before and after binding events occur. Noncovalently functionalized constructs, such as cucurbituril- and cyclodextrin-based biosensors, benefit from commercial availability and optimal exchange dynamics for CEST imaging. In this work, we report the first directly functionalized cucurbituril used as a xenon biosensor. Biotinylated cucurbit[7]uril (btCB7) gives rise to a 129 Xe hyperCEST response at the unusual shift of δ=28 ppm when bound to its protein target with substantial CEST contrast. We posit that the observed chemical shift is due to the deformation of btCB7 upon binding to avidin, caused by proximity to the protein surface. Conformational searches and molecular dynamics (MD) simulations support this hypothesis. This construct combines the strengths of both families of biosensors, enables a multitude of biological targets through avidin conjugation, and demonstrates the advantages of functionalized cucurbituril-based biosensors.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  129Xe NMR spectroscopy; biosensors; host-guest systems; hyperpolarization; imaging agents

Mesh:

Substances:

Year:  2019        PMID: 30868660      PMCID: PMC6557571          DOI: 10.1002/chem.201900610

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  35 in total

1.  Nuclear magnetic shielding and chirality IV. The odd and even character of the shielding response to a chiral potential.

Authors:  Devin N Sears; Cynthia J Jameson; Robert A Harris
Journal:  J Chem Phys       Date:  2004-02-15       Impact factor: 3.488

Review 2.  Hyperpolarized xenon in NMR and MRI.

Authors:  Ana-Maria Oros; N Jon Shah
Journal:  Phys Med Biol       Date:  2004-10-21       Impact factor: 3.609

3.  Optimization of xenon biosensors for detection of protein interactions.

Authors:  Thomas J Lowery; Sandra Garcia; Lana Chavez; E Janette Ruiz; Tom Wu; Thierry Brotin; Jean-Pierre Dutasta; David S King; Peter G Schultz; Alex Pines; David E Wemmer
Journal:  Chembiochem       Date:  2006-01       Impact factor: 3.164

4.  The inverted cucurbit[n]uril family.

Authors:  Lyle Isaacs; Sang-Kyu Park; Simin Liu; Young Ho Ko; Narayanan Selvapalam; Youngkook Kim; Hyunuk Kim; Peter Y Zavalij; Ghyung-Hwa Kim; Heung-Soo Lee; Kimoon Kim
Journal:  J Am Chem Soc       Date:  2005-12-28       Impact factor: 15.419

5.  Kinetic trapping of the host-guest association intermediate and its transformation into a thermodynamic inclusion complex.

Authors:  Oksana Danylyuk; Vladimir P Fedin; Volodymyr Sashuk
Journal:  Chem Commun (Camb)       Date:  2013-01-29       Impact factor: 6.222

Review 6.  Xenon for NMR biosensing--inert but alert.

Authors:  Leif Schröder
Journal:  Phys Med       Date:  2011-11-26       Impact factor: 2.685

7.  Novel molecular drug carrier: encapsulation of oxaliplatin in cucurbit[7]uril and its effects on stability and reactivity of the drug.

Authors:  Young Jin Jeon; Soo-Young Kim; Young Ho Ko; Shigeru Sakamoto; Kentaro Yamaguchi; Kimoon Kim
Journal:  Org Biomol Chem       Date:  2005-04-28       Impact factor: 3.876

8.  Water soluble cucurbit[6]uril derivative as a potential Xe carrier for 129Xe NMR-based biosensors.

Authors:  Byoung Soo Kim; Young Ho Ko; Youngkook Kim; Hyeong Ju Lee; N Selvapalam; Hee Cheon Lee; Kimoon Kim
Journal:  Chem Commun (Camb)       Date:  2008-05-19       Impact factor: 6.222

9.  Hyperpolarized xenon for NMR and MRI applications.

Authors:  Christopher Witte; Martin Kunth; Jörg Döpfert; Federica Rossella; Leif Schröder
Journal:  J Vis Exp       Date:  2012-09-06       Impact factor: 1.355

10.  Cucurbit[7]uril containers for targeted delivery of oxaliplatin to cancer cells.

Authors:  Liping Cao; Gaya Hettiarachchi; Volker Briken; Lyle Isaacs
Journal:  Angew Chem Int Ed Engl       Date:  2013-09-13       Impact factor: 15.336

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  5 in total

1.  Rotaxane Probes for the Detection of Hydrogen Peroxide by 129 Xe HyperCEST NMR Spectroscopy.

Authors:  Sarah H Klass; Ashley E Truxal; Tahoe A Fiala; Joseph Kelly; Dang Nguyen; Joel A Finbloom; David E Wemmer; Alexander Pines; Matthew B Francis
Journal:  Angew Chem Int Ed Engl       Date:  2019-06-11       Impact factor: 15.336

Review 2.  Molecular Sensing with Host Systems for Hyperpolarized 129Xe.

Authors:  Jabadurai Jayapaul; Leif Schröder
Journal:  Molecules       Date:  2020-10-11       Impact factor: 4.411

3.  Xenon binding by a tight yet adaptive chiral soft capsule.

Authors:  Shi-Xin Nie; Hao Guo; Teng-Yu Huang; Yu-Fei Ao; De-Xian Wang; Qi-Qiang Wang
Journal:  Nat Commun       Date:  2020-12-07       Impact factor: 14.919

Review 4.  Enzyme assays with supramolecular chemosensors - the label-free approach.

Authors:  Mohamed Nilam; Andreas Hennig
Journal:  RSC Adv       Date:  2022-04-06       Impact factor: 3.361

Review 5.  Probing Reversible Guest Binding with Hyperpolarized 129Xe-NMR: Characteristics and Applications for Cucurbit[n]urils.

Authors:  Jabadurai Jayapaul; Leif Schröder
Journal:  Molecules       Date:  2020-02-20       Impact factor: 4.411

  5 in total

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