Literature DB >> 30867595

Enzyme-catalysed [6+4] cycloadditions in the biosynthesis of natural products.

Bo Zhang1, Kai Biao Wang1, Wen Wang1, Xin Wang2, Fang Liu2, Jiapeng Zhu3, Jing Shi1, Ling Yu Li1, Hao Han1, Kuang Xu1, Hong Yun Qiao1, Xiao Zhang2, Rui Hua Jiao1, Kendall N Houk4, Yong Liang5, Ren Xiang Tan6,7, Hui Ming Ge8.   

Abstract

Pericyclic reactions are powerful transformations for the construction of carbon-carbon and carbon-heteroatom bonds in organic synthesis. Their role in biosynthesis is increasingly apparent, and mechanisms by which pericyclases can catalyse reactions are of major interest1. [4+2] cycloadditions (Diels-Alder reactions) have been widely used in organic synthesis2 for the formation of six-membered rings and are now well-established in biosynthesis3-6. [6+4] and other 'higher-order' cycloadditions were predicted7 in 1965, and are now increasingly common in the laboratory despite challenges arising from the generation of a highly strained ten-membered ring system8,9. However, although enzyme-catalysed [6+4] cycloadditions have been proposed10-12, they have not been proven to occur. Here we demonstrate a group of enzymes that catalyse a pericyclic [6+4] cycloaddition, which is a crucial step in the biosynthesis of streptoseomycin-type natural products. This type of pericyclase catalyses [6+4] and [4+2] cycloadditions through a single ambimodal transition state, which is consistent with previous proposals11,12. The [6+4] product is transformed to a less stable [4+2] adduct via a facile Cope rearrangement, and the [4+2] adduct is converted into the natural product enzymatically. Crystal structures of three pericyclases, computational simulations of potential energies and molecular dynamics, and site-directed mutagenesis establish the mechanism of this transformation. This work shows how enzymes are able to catalyse concerted pericyclic reactions involving ambimodal transition states.

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Year:  2019        PMID: 30867595      PMCID: PMC6944468          DOI: 10.1038/s41586-019-1021-x

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  12 in total

1.  Enzymatic Intermolecular Hetero-Diels-Alder Reaction in the Biosynthesis of Tropolonic Sesquiterpenes.

Authors:  Qibin Chen; Jie Gao; Cooper Jamieson; Jiawang Liu; Masao Ohashi; Jian Bai; Daojian Yan; Bingyu Liu; Yongsheng Che; Yanan Wang; K N Houk; Youcai Hu
Journal:  J Am Chem Soc       Date:  2019-09-03       Impact factor: 15.419

2.  FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis.

Authors:  Lei Gao; Cong Su; Xiaoxia Du; Ruishan Wang; Shuming Chen; Yu Zhou; Chengwei Liu; Xiaojing Liu; Runze Tian; Liyun Zhang; Kebo Xie; She Chen; Qianqian Guo; Lanping Guo; Yoshio Hano; Manabu Shimazaki; Atsushi Minami; Hideaki Oikawa; Niu Huang; K N Houk; Luqi Huang; Jungui Dai; Xiaoguang Lei
Journal:  Nat Chem       Date:  2020-05-25       Impact factor: 24.427

3.  Mechanism of the Stereoselective Catalysis of Diels-Alderase PyrE3 Involved in Pyrroindomycin Biosynthesis.

Authors:  Bo Li; Xingyi Guan; Song Yang; Yike Zou; Wen Liu; K N Houk
Journal:  J Am Chem Soc       Date:  2022-03-08       Impact factor: 16.383

4.  Crystal Structures of Fsa2 and Phm7 Catalyzing [4 + 2] Cycloaddition Reactions with Reverse Stereoselectivities in Equisetin and Phomasetin Biosynthesis.

Authors:  Changbiao Chi; Zhengdong Wang; Tan Liu; Zhongyi Zhang; Huan Zhou; Annan Li; Hongwei Jin; Hongli Jia; Fuling Yin; Donghui Yang; Ming Ma
Journal:  ACS Omega       Date:  2021-05-06

5.  Engineering of Ancestors as a Tool to Elucidate Structure, Mechanism, and Specificity of Extant Terpene Cyclase.

Authors:  Karen Schriever; Patricia Saenz-Mendez; Reshma Srilakshmi Rudraraju; Natalie M Hendrikse; Elton P Hudson; Antonino Biundo; Robert Schnell; Per-Olof Syrén
Journal:  J Am Chem Soc       Date:  2021-01-26       Impact factor: 15.419

6.  A [6+4]-cycloaddition adduct is the biosynthetic intermediate in streptoseomycin biosynthesis.

Authors:  Kai Biao Wang; Wen Wang; Bo Zhang; Xin Wang; Yu Chen; Hong Jie Zhu; Yong Liang; Ren Xiang Tan; Hui Ming Ge
Journal:  Nat Commun       Date:  2021-04-07       Impact factor: 14.919

7.  Total synthesis of nahuoic acid A via a putative biogenetic intramolecular Diels-Alder (IMDA) reaction.

Authors:  Lucía Guillade; Paula Mora; Pedro Villar; Rosana Alvarez; Angel R de Lera
Journal:  Chem Sci       Date:  2021-10-27       Impact factor: 9.825

Review 8.  Discovery and investigation of natural Diels-Alderases.

Authors:  Kenji Watanabe
Journal:  J Nat Med       Date:  2021-03-08       Impact factor: 2.343

9.  Identification and confirmation of 14-3-3 ζ as a novel target of ginsenosides in brain tissues.

Authors:  Feiyan Chen; Lin Chen; Weifeng Liang; Zhengguang Zhang; Jiao Li; Wan Zheng; Zhu Zhu; Jiapeng Zhu; Yunan Zhao
Journal:  J Ginseng Res       Date:  2020-12-29       Impact factor: 6.060

10.  An enzymatic Alder-ene reaction.

Authors:  Masao Ohashi; Cooper S Jamieson; Yujuan Cai; Dan Tan; Daiki Kanayama; Man-Cheng Tang; Sarah M Anthony; Jason V Chari; Joyann S Barber; Elias Picazo; Thomas B Kakule; Shugeng Cao; Neil K Garg; Jiahai Zhou; K N Houk; Yi Tang
Journal:  Nature       Date:  2020-09-30       Impact factor: 49.962

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