| Literature DB >> 30863411 |
Iris L A Bodewes1, Peter J van der Spek2,3, Leticia G Leon1, Annemarie J M Wijkhuijs1, Cornelia G van Helden-Meeuwsen1, Liselotte Tas1, Marco W J Schreurs1, Paul L A van Daele4, Peter D Katsikis1, Marjan A Versnel1.
Abstract
Background: Primary Sjögren's syndrome (pSS) is a systemic autoimmune disease, where patients often suffer from fatigue. Biological pathways underlying fatigue are unknown. In this study aptamer-based SOMAscan technology is used to identify potential biomarkers and treatment targets for fatigue in pSS.Entities:
Keywords: SOMAscan; Sjögren's syndrome; fatigue; interferon; proteomics
Mesh:
Substances:
Year: 2019 PMID: 30863411 PMCID: PMC6399420 DOI: 10.3389/fimmu.2019.00312
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 7.561
Figure 1Differential protein expression in serum of pSS and healthy controls. Heatmap of differentially expressed proteins measured by SOMAscan technology in serum samples of pSS patients (pSS) (n = 63) and healthy controls (CON) (n = 20) clustered unsupervised within the groups (A) and volcano plot (B) visualizing the same DEPs. The correlation between RFU determined by SOMAscan and protein levels determined by ELISA is shown in (C).
Characteristics fatigued and non-fatigued pSS patients.
| Female (%) | 22/22 (100) | 21/23 (91) | n.s. |
| Mean age (years) | 58.7 ± 11.3 | 57.3 ± 12.4 | n.s. |
| Disease duration (years) | 11.0 (15.5) | 11.5 (16.8) | n.s. |
| ESSDAI | 7.5 (8.0) | 4.0 (9.5) | n.s. |
| IFN score | 3.6 (9.4) | 11.2 (8.7) | |
| CES-D | 27.0 (18.0) | 6.0 (4.0) | |
| MFI | |||
| General fatigue | 20.0 (1.5) | 10.0 (6.0) | |
| Physical fatigue | 19.0 (3.0) | 8.0 (5.5) | |
| Mental fatigue | 17.0 (5.5) | 7.0 (5.0) | |
| Reduced motivation | 17.0 (5.0) | 6.0 (4.0) | |
| Reduced activity | 18.0 (4.0) | 7.0 (5.0) | |
| Pilocarpine | 11/22 (50) | 8/23 (35) | n.s. |
| Hydroxychloroquine | 14/22 (64) | 15/23 (65) | n.s. |
| Corticosteroids | 1/22 (5) | 1/23 (4) | n.s. |
Data are presented as mean ± SD, median (IQR) or as number (%) of patients according to data distribution.
Patients are selected from the cohort by a cut-off the 25 percentile highest (fatigued group) and lowest scores (non-fatigued group) in the MFI.
ESSDAI, the European League Against Rheumatism Sjögren's Syndrome Disease Activity Index; IFN, interferon; MFI, multiple fatigue inventory.
Figure 2Differential protein expression in serum of fatigued pSS patients. Heatmap showing the unsupervised clustering of differentially expressed proteins between fatigued (n = 22) and non-fatigued (n = 23) pSS patients (A) and volcano plot (B) visualizing the same DEPs. (C) Correlation between RFU determined by SOMAscan and protein levels determined by ELISA (for ENO1 and EGF) and Immage nephelometer (for C3 and C4). (D) Comparison of complement levels, IFN and ESSDAI score between fatigued and non-fatigued pSS patients.
Differentially expressed proteins between fatigued and non-fatigued pSS patients.
| SNAP25 | 2.01 | 5.90E-04 | Presynaptic plasma membrane protein involved in the regulation of neurotransmitter release. Restricted expression in brain. |
| C4b | 1.67 | 1.04E-02 | Basic form of complement factor 4, part of the classical activation pathway. |
| IL36A | 1.53 | 1.44E-03 | Cytokine that can activate NF-kappa-B and MAPK signaling pathways to generate an inflammatory response. |
| C3a | 1.43 | 6.68E-03 | C3a is an anaphylatoxin released during activation of the complement system. |
| UCHL1 | 1.14 | 2.69E-02 | Belongs to the peptidase C12 family. This enzyme is a thiol protease that hydrolyzes a peptide bond at the C-terminal glycine of ubiquitin. This gene is specifically expressed in the neurons and in cells of the diffuse neuroendocrine system. |
| ENO1 | 1.00 | 1.10E-02 | Alpha-enolase, glycolytic enzyme. Alpha-enolase has also been identified as an autoantigen in Hashimoto encephalopathy. |
| iC3b | 0.98 | 4.56E-04 | Proteolytically inactive product of the complement cleavage fragment C3b that still opsonizes microbes, but cannot associate with factor B. |
| GPD1 | 0.91 | 2.69E-02 | Member of the NAD-dependent glycerol-3-phosphate dehydrogenase family. The encoded protein plays a critical role in carbohydrate and lipid metabolism. |
| C3d | 0.69 | 5.60E-02 | 302-amino-acid fragment in the alpha chain of C3b. |
| BMP6 | 0.66 | 2.94E-02 | Secreted ligand of the TGF-beta (transforming growth factor-beta) superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate gene expression. |
| C3 | 0.55 | 3.98E-02 | Complement component C3 plays a central role in the activation of the complement system. |
| GOT1 | 0.34 | 2.69E-02 | Glutamic-oxaloacetic transaminase is a pyridoxal phosphate-dependent enzyme which exists in cytoplasmic and mitochondrial forms, GOT1 and GOT2, respectively. GOT plays a role in amino acid metabolism and the urea and tricarboxylic acid cycles. |
| MAP2K1 | 0.30 | 3.98E-02 | The protein encoded by this gene is a member of the dual specificity protein kinase family, which acts as a mitogen-activated protein (MAP) kinase kinase. MAP kinases, also known as extracellular signal-regulated kinases (ERKs), act as an integration point for multiple biochemical signals. |
| CLEC4M | 0.23 | 4.60E-02 | Involved in the innate immune system and recognizes numerous evolutionarily divergent pathogens ranging from parasites to viruses |
| FTCD | −1.24 | 2.94E-02 | The protein encoded by this gene is a bifunctional enzyme that channels 1-carbon units from formiminoglutamate, a metabolite of the histidine degradation pathway, to the folate pool. |
| EGF | −1.07 | 2.94E-02 | Member of the epidermal growth factor superfamily. |
Figure 3Discriminatory capacity of markers for fatigue in pSS. (A) ROC curves of positively and negatively predictive proteins (2LogFC>1) for fatigue in pSS. (B) Boxplots of differentially expressed proteins between fatigued (n = 22) and non-fatigued (n = 23) pSS patients.
Area under the ROC Curve for markers for fatigue in pSS.
| SNAP25 | 0.781 | 0.075 | 0.001 | 0.634 | 0.927 |
| C4a_C4b | 0.824 | 0.064 | 0.000 | 0.699 | 0.949 |
| IL36a | 0.819 | 0.065 | 0.000 | 0.692 | 0.945 |
| C3a | 0.845 | 0.061 | 0.000 | 0.724 | 0.965 |
| UCHL1 | 0.752 | 0.078 | 0.003 | 0.599 | 0.906 |
| ENO1 | 0.790 | 0.071 | 0.001 | 0.650 | 0.930 |
| EGF | 0.837 | 0.061 | 0.000 | 0.718 | 0.957 |
| FTCD | 0.811 | 0.064 | 0.000 | 0.686 | 0.936 |
Under the non-parametric assumption.
Null hypothesis: true area = 0.5.