Literature DB >> 30855260

M-BLANK: a program for the fitting of X-ray fluorescence spectra.

Andrew M Crawford1, Aniruddha Deb1, James E Penner-Hahn1.   

Abstract

The X-ray fluorescence data from X-ray microprobe and nanoprobe measurements must be fitted to obtain reliable elemental maps. The most common approach in many fitting programs is to initially remove a per-pixel baseline. Using X-ray fluorescence data of yeast and glial cells, it is shown that per-pixel baselines can result in significant, systematic errors in quantitation and that significantly improved data can be obtained by calculating an average blank spectrum and subtracting this from each pixel.

Entities:  

Keywords:  X-ray fluorescence; X-ray microprobes; X-ray nanoprobes; elemental maps; per-pixel baselines

Year:  2019        PMID: 30855260      PMCID: PMC6412182          DOI: 10.1107/S1600577519000651

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  14 in total

Review 1.  X-ray fluorescence microprobe imaging in biology and medicine.

Authors:  Tatjana Paunesku; Stefan Vogt; Jörg Maser; Barry Lai; Gayle Woloschak
Journal:  J Cell Biochem       Date:  2006-12-15       Impact factor: 4.429

2.  Development of a single-cell X-ray fluorescence flow cytometer.

Authors:  Andrew M Crawford; Patrick Kurecka; Tsz Kwan Yim; Claire Kozemchak; Aniruddha Deb; Lubomír Dostál; Cheng Jun Sun; Dale L Brewe; Raul Barrea; James E Penner-Hahn
Journal:  J Synchrotron Radiat       Date:  2016-06-17       Impact factor: 2.616

Review 3.  Bio-metals imaging and speciation in cells using proton and synchrotron radiation X-ray microspectroscopy.

Authors:  Richard Ortega; Guillaume Devès; Asunción Carmona
Journal:  J R Soc Interface       Date:  2009-07-15       Impact factor: 4.118

4.  35 years of EDS software.

Authors:  Frederick H Schamber
Journal:  Microsc Microanal       Date:  2009-12       Impact factor: 4.127

5.  Unsupervised cell identification on multidimensional X-ray fluorescence datasets.

Authors:  Siwei Wang; Jesse Ward; Sven Leyffer; Stefan M Wild; Chris Jacobsen; Stefan Vogt
Journal:  J Synchrotron Radiat       Date:  2014-03-15       Impact factor: 2.616

6.  Silicon nitride as a versatile growth substrate for microspectroscopic imaging and mapping of individual cells.

Authors:  Elizabeth A Carter; Benjamin S Rayner; Andrew I McLeod; Lindsay E Wu; Craig P Marshall; Aviva Levina; Jade B Aitken; Paul K Witting; Barry Lai; Zhonghou Cai; Stefan Vogt; Yao-Chang Lee; Ching-Iue Chen; Mark J Tobin; Hugh H Harris; Peter A Lay
Journal:  Mol Biosyst       Date:  2010-05-06

Review 7.  Elemental and chemically specific X-ray fluorescence imaging of biological systems.

Authors:  M Jake Pushie; Ingrid J Pickering; Malgorzata Korbas; Mark J Hackett; Graham N George
Journal:  Chem Rev       Date:  2014-08-07       Impact factor: 60.622

Review 8.  Opportunities in multidimensional trace metal imaging: taking copper-associated disease research to the next level.

Authors:  Stefan Vogt; Martina Ralle
Journal:  Anal Bioanal Chem       Date:  2012-10-19       Impact factor: 4.142

Review 9.  Methodological approaches for using synchrotron X-ray fluorescence (SXRF) imaging as a tool in ionomics: examples from Arabidopsis thaliana.

Authors:  Tracy Punshon; Felipe Klein Ricachenevsky; Maria Hindt; Amanda L Socha; Hélène Zuber
Journal:  Metallomics       Date:  2013-09       Impact factor: 4.526

10.  Imaging element distribution and speciation in plant cells.

Authors:  Fang-Jie Zhao; Katie L Moore; Enzo Lombi; Yong-Guan Zhu
Journal:  Trends Plant Sci       Date:  2014-01-04       Impact factor: 22.012

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