Literature DB >> 30853353

Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies.

Yi-Zhou Jiang1, Ding Ma1, Chen Suo2, Jinxiu Shi3, Mengzhu Xue4, Xin Hu1, Yi Xiao1, Ke-Da Yu1, Yi-Rong Liu1, Ying Yu5, Yuanting Zheng5, Xiangnan Li5, Chenhui Zhang3, Pengchen Hu3, Jing Zhang3, Qi Hua3, Jiyang Zhang5, Wanwan Hou5, Luyao Ren5, Ding Bao5, Bingying Li5, Jingcheng Yang5, Ling Yao1, Wen-Jia Zuo1, Shen Zhao1, Yue Gong1, Yi-Xing Ren1, Ya-Xin Zhao1, Yun-Song Yang1, Zhenmin Niu3, Zhi-Gang Cao1, Daniel G Stover6, Claire Verschraegen6, Virginia Kaklamani7, Anneleen Daemen8, John R Benson9, Kazuaki Takabe10, Fan Bai11, Da-Qiang Li1, Peng Wang12, Leming Shi13, Wei Huang14, Zhi-Ming Shao15.   

Abstract

We comprehensively analyzed clinical, genomic, and transcriptomic data of a cohort of 465 primary triple-negative breast cancer (TNBC). PIK3CA mutations and copy-number gains of chromosome 22q11 were more frequent in our Chinese cohort than in The Cancer Genome Atlas. We classified TNBCs into four transcriptome-based subtypes: (1) luminal androgen receptor (LAR), (2) immunomodulatory, (3) basal-like immune-suppressed, and (4) mesenchymal-like. Putative therapeutic targets or biomarkers were identified among each subtype. Importantly, the LAR subtype showed more ERBB2 somatic mutations, infrequent mutational signature 3 and frequent CDKN2A loss. The comprehensive profile of TNBCs provided here will serve as a reference to further advance the understanding and precision treatment of TNBC.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  genomic; molecular subtype; precision therapies; target; transcriptomic; triple-negative breast cancer

Mesh:

Substances:

Year:  2019        PMID: 30853353     DOI: 10.1016/j.ccell.2019.02.001

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  172 in total

1.  Therapeutic Clues from an Integrated Omic Assessment of East Asian Triple Negative Breast Cancers.

Authors:  Laura M Heiser; Gordon B Mills; Joe W Gray
Journal:  Cancer Cell       Date:  2019-03-18       Impact factor: 31.743

2.  Triple-Negative Breast Cancer Cells Exhibit Differential Sensitivity to Cardenolides from Calotropis gigantea.

Authors:  Petra J Pederson; Shengxin Cai; Chase Carver; Douglas R Powell; April L Risinger; Tanja Grkovic; Barry R O'Keefe; Susan L Mooberry; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2020-07-10       Impact factor: 4.050

3.  In situ CRISPR-Cas9 base editing for the development of genetically engineered mouse models of breast cancer.

Authors:  Stefano Annunziato; Catrin Lutz; Linda Henneman; Jinhyuk Bhin; Kim Wong; Bjørn Siteur; Bas van Gerwen; Renske de Korte-Grimmerink; Maria Paz Zafra; Emma M Schatoff; Anne Paulien Drenth; Eline van der Burg; Timo Eijkman; Siddhartha Mukherjee; Katharina Boroviak; Lodewyk Fa Wessels; Marieke van de Ven; Ivo J Huijbers; David J Adams; Lukas E Dow; Jos Jonkers
Journal:  EMBO J       Date:  2020-01-13       Impact factor: 11.598

4.  PIK3Cδ expression by fibroblasts promotes triple-negative breast cancer progression.

Authors:  Teresa Gagliano; Kalpit Shah; Sofia Gargani; Liyan Lao; Mansour Alsaleem; Jianing Chen; Vasileios Ntafis; Penghan Huang; Angeliki Ditsiou; Viviana Vella; Kritika Yadav; Kamila Bienkowska; Giulia Bresciani; Kai Kang; Leping Li; Philip Carter; Graeme Benstead-Hume; Timothy O'Hanlon; Michael Dean; Frances Mg Pearl; Soo-Chin Lee; Emad A Rakha; Andrew R Green; Dimitris L Kontoyiannis; Erwei Song; Justin Stebbing; Georgios Giamas
Journal:  J Clin Invest       Date:  2020-06-01       Impact factor: 14.808

5.  Tektin4 loss promotes triple-negative breast cancer metastasis through HDAC6-mediated tubulin deacetylation and increases sensitivity to HDAC6 inhibitor.

Authors:  Li-Ping Ge; Xi Jin; Yun-Song Yang; Xi-Yu Liu; Zhi-Ming Shao; Gen-Hong Di; Yi-Zhou Jiang
Journal:  Oncogene       Date:  2021-03-02       Impact factor: 9.867

6.  The feasibility of circulating tumor DNA analysis as a marker of recurrence in triple-negative breast cancer.

Authors:  Satoshi Okazaki; Takaaki Sasaki; Shunsuke Yasuda; Masahiro Abe; Nana Yoshida; Ryohei Yoshida; Kei Ishibashi; Yoshinori Minami; Shunsuke Okumura; Shinichi Chiba; Hidehiro Takei; Ryusuke Hayashi; Toshihiro Nagato; Hiroya Kobayashi; Ayumu Sugitani; Yusuke Ono; Yusuke Mizukami; Masahiro Kitada; Yoshinobu Ohsaki
Journal:  Oncol Lett       Date:  2021-03-28       Impact factor: 2.967

7.  Sample-specific perturbation of gene interactions identifies breast cancer subtypes.

Authors:  Yuanyuan Chen; Yu Gu; Zixi Hu; Xiao Sun
Journal:  Brief Bioinform       Date:  2021-07-20       Impact factor: 11.622

Review 8.  Immune Checkpoint Inhibition for Triple-Negative Breast Cancer: Current Landscape and Future Perspectives.

Authors:  Huimei Yi; Ying Li; Yuan Tan; Shujun Fu; Faqing Tang; Xiyun Deng
Journal:  Front Oncol       Date:  2021-05-19       Impact factor: 6.244

9.  Deciphering the performance of polo-like kinase 1 in triple-negative breast cancer progression according to the centromere protein U-phosphorylation pathway.

Authors:  Shaorong Zhao; Yannan Geng; Lixia Cao; Qianxi Yang; Teng Pan; Dongdong Zhou; Jingjing Liu; Zhendong Shi; Jin Zhang
Journal:  Am J Cancer Res       Date:  2021-05-15       Impact factor: 6.166

10.  Leucinostatins from Ophiocordyceps spp. and Purpureocillium spp. Demonstrate Selective Antiproliferative Effects in Cells Representing the Luminal Androgen Receptor Subtype of Triple Negative Breast Cancer.

Authors:  Yun-Seo Kil; April L Risinger; Cora L Petersen; Susan L Mooberry; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2020-06-08       Impact factor: 4.050

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