| Literature DB >> 30849965 |
Xiaocheng Gong1, Aoxue Hu1, Xuepeng Li1, Jun He1, Zhongxing Wu1, Xi Zuo1, Pengbo Ning2,3.
Abstract
BACKGROUND: The Shimen strain of classical swine fever (CSF) virus (CSFV) causes CSF, which is mainly characterised by disseminated intravascular haemorrhage. Macrophages are an essential component of innate immunity against pathogenic microorganisms; however, the role of macrophages in CSF pathogenesis remains unclear. To illuminate the infective mechanism of CSFV, we used gene co-expression networks derived from macrophages infected with CSFV Shimen and CSFV C as well as uninfected macrophages to screen key regulatory genes, and their contributions to the pathogenesis of CSF were discussed.Entities:
Keywords: CSFV Shimen; Macrophages; VEGFA; uPA
Mesh:
Substances:
Year: 2019 PMID: 30849965 PMCID: PMC6407193 DOI: 10.1186/s12917-019-1826-8
Source DB: PubMed Journal: BMC Vet Res ISSN: 1746-6148 Impact factor: 2.741
Fig. 1The role of VEGFA and PLAU in the co-expression network of cells infected by CSFV Shimen. (a) The co-expression network shows that VEGFA and PLAU are up-regulated in CSFV Shimen-infected cells compared to their levels in CSFV C-infected and mock-infected cells. (b) protein–protein interaction analysis of VEGFA. Each network node represents all proteins produced by a single protein-coding gene locus, and the edges represent protein-protein associations, which means proteins together contribute to shared functions. The meaning of the network edge is confidence, and the thickness of the line indicates the strength of data supports, which edge confidence is divided into 3 levels: medium (0.400), high (0.700), and highest (0.900). (c) GO analysis shows that aberrant expression of VEGFA is related to anomalous regulation of gene function groups
Fig. 2VEGFA and PLAU mRNA expression are positively correlated with CSFV Shimen infection. (a) DGE analysis shows that VEGFA and PLAU are up-regulated in CSFV Shimen-infected cells compared with levels in CSFV C-infected and mock-infected cells. (b) qPCR analysis of CSFV Shimen and C strain proliferation in macrophages. (c) qPCR analysis of VEGFA mRNA expression. (d) qPCR analysis of PLAU mRNA expression. Significant up-regulated (p-value < 0.05) on VEGFA and PLAU were observed between the 0 and 48 h groups for CSFV Shimen infection in qPCR analysis. Three independent qPCR experiments always obtained consistent conclusion, and one of the results was shown
Fig. 3Western-blotting analysis of VEGFA and uPA in CSFV Shimen-, CSFV C-, and mock-infected macrophages. β-actin was used as a loading control
Fig. 4Temporal colocalisation of CSFV E2 with VEGFA and uPA in CSFV Shimen-infected macrophages. (a) Co-localization of CSFV E2 protein with VEGFA in macrophages infected with CSFV Shimen. (b) Co-localization of CSFV E2 protein with uPA in macrophages infected with CSFV Shimen. CSFV E2 antibody fluorescent signals are shown in green, VEGFA and uPA antibody signals in red, and nuclear signals in blue