| Literature DB >> 30849954 |
Yuan Xu1,2,3, Shiying Kong4,5,6, Winson Y Cheung5,6, Antoine Bouchard-Fortier4,5,6, Joseph C Dort4,5,6,7, Hude Quan5, Elizabeth M Buie4, Geoff McKinnon4, May Lynn Quan4,5,6.
Abstract
BACKGROUND: Recurrence is not explicitly documented in cancer registry data that are widely used for research. Patterns of events after initial treatment such as oncology visits, re-operation, and receipt of subsequent chemotherapy or radiation may indicate recurrence. This study aimed to develop and validate algorithms for identifying breast cancer recurrence using routinely collected administrative data.Entities:
Keywords: Breast cancer recurrence; Case-finding algorithm; Validation study
Mesh:
Year: 2019 PMID: 30849954 PMCID: PMC6408837 DOI: 10.1186/s12885-019-5432-8
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
description of the patient characteristics, treatments and other variables
| Characteristic | All women ( | Women who did not have recurrence ( | Women who had recurrence ( | |
|---|---|---|---|---|
| Age, Median (IQR), year | 40 (36–53) | 40 (36–54) | 40 (36–50) | 0.272 |
| Study follow-up, Median (IQR), year | 4 (3–5) | 4 (2–5) | 4 (3–5) | 0.091 |
| Year of Diagnosis | 0.33 | |||
| 2007–2009 | 259 (43.3) | 208 (43.6) | 51 (42.1) | |
| 2010–2012 | 192 (32.1) | 147 (30.8) | 45 (37.2) | |
| 2013–2015 | 147 (24.6) | 122 (25.6) | 25 (20.8) | |
| Stage | <.0001 | |||
| 0 | 2 (0.3) | 2 (0.4) | 0 (0) | |
| I | 93 (15.6) | 84 (17.6) | 9 (7.4) | |
| II | 311 (52.0) | 270 (56.6) | 41 (33.9) | |
| III | 192 (32.1) | 121 (25.4) | 71 (58.7) | |
| Tumor grade | 0.012 | |||
| 1 | 32 (5.3) | 32 (6.7) | 0 (0.0) | |
| 2 | 211 (35.3) | 167 (35.0) | 44 (36.4) | |
| 3 | 342 (57.2) | 270 (56.6) | 72 (59.5) | |
| Unknown | 13 (2.2) | 8 (1.7) | 5 (4.1) | |
| Histology | 0.352 | |||
| Ductal | 538 (90.0) | 432 (90.6) | 106 (87.6) | |
| Lobular | 27 (4.5) | 22 (4.6) | 5 (4.1) | |
| Ductal lobular mixed | 10 (1.7) | 6 (1.3) | 4 (3.3) | |
| Other | 23 (3.8) | 17 (3.5) | 6 (5.0) | |
| ER status | 0.266 | |||
| Positive | 439 (73.4) | 355 (74.4) | 84 (69.4) | |
| Negative | 159 (26.6) | 123 (25.6) | 37 (30.6) | |
| PR status | 0.216 | |||
| Positive | 375 (62.7) | 305 (63.9) | 70 (57.8) | |
| Negative | 223 (37.3) | 172 (36.1) | 51 (42.2) | |
| HER2 status | 0.028 | |||
| Positive | 161 (26.9) | 138 (28.9) | 23 (19.0) | |
| Negative | 437 (73.1) | 339 (71.1) | 98 (81.0) | |
| Surgery | 0.003 | |||
| No surgery | 5 (0.8) | 4 (0.8) | 1 (0.8) | |
| BCS | 159 (26.6) | 141 (29.6) | 18 (14.9) | |
| Mastectomy | 434 (72.6) | 332 (69.6) | 102 (84.3) | |
| Chemotherapy | 0.614 | |||
| Yes | 547 (91.5) | 436 (91.4) | 111 (91.8) | |
| No | 40 (6.7) | 31 (6.5) | 9 (7.4) | |
| Unknown | 11 (1.8) | 10 (2.1) | 1 (0.8) | |
| Radiation therapy | 0.587 | |||
| Yes | 194 (32.4) | 150 (31.5) | 44 (36.4) | |
| No | 209 (35.0) | 169 (35.4) | 40 (33.0) | |
| Unknown | 195 (32.6) | 158 (33.1) | 37 (30.6) | |
| Hormone therapy | 0.396 | |||
| Yes | 214 (35.8) | 177 (37.1) | 37 (30.6) | |
| No | 192 (32.1) | 149 (31.2) | 43 (35.5) | |
| Unknown | 192 (32.1) | 151 (31.7) | 41 (33.9) | |
| Death | <.0001 | |||
| Yes | 92 (15.4) | 13 (2.7) | 77 (63.6) | |
| No | 506 (84.6) | 464 (97.3) | 44 (36.4) | |
| Cause of death | <.0001 | |||
| Death due to breast cancer | 76 (12.7) | 10 (2.1) | 66 (54.5) | |
| Death due to other causes | 16 (2.7) | 3 (0.6) | 11 (9.1) | |
| Alive | 506 (84.6) | 464 (97.3) | 44 (36.4) |
IQR interquartile range, ER estrogen receptor, PR progesterone receptor, HER2 Human Epidermal growth factor Receptor 2
the validity of the algorithms
| Algorithm | Sensitivity | Specificity | PPV | NPV | Accuracy |
|---|---|---|---|---|---|
| (%, 95 CI) | (%, 95 CI) | (%, 95 CI) | (%, 95 CI) | (%, 95 CI) | |
| High sensitivity | 94.2 | 93.7 | 79.2 | 98.5 | 93.8 |
| (90.1–98.4) | (91.5–95.9) | (72.5–85.8) | (97.3–99.6) | (91.9–95.7) | |
| High PPV | 75.2 | 98.3 | 91.9 | 94 | 93.6 |
| (67.5–82.9) | (97.2–99.5) | (86.6–97.3) | (91.9–96.1) | (91.7–95.6) | |
| High accuracy | 85.1 | 97.3 | 88.8 | 96.3 | 94.8 |
| (78.8–91.5) | (95.8–98.7) | (83.1–94,5) | (94.6–98) | (93–96.6) | |
| Balanced sensitivity and PPV | 89.3 | 96.2 | 85.7 | 97.2 | 94.8 |
| (83.7–94.8) | (94.5–97.9) | (79.6–91.8) | (95.8–98.7) | (93.0–96.6) | |
| Balanced specificity and NPV | 91.7 | 94.5 | 81.0 | 97.8 | 94.0 |
| (86.8–96.6) | (92.5–96.6) | (74.5–87.6) | (96.5–99.2) | (92.1–95.9) | |
| Combining high sensitivity and high PPV algorithms plus chart review | 94.2 | 98.3 | 93.4 | 98.5 | 97.5 |
| (90.1–98.4) | (97.2–99.5) | (89.1–97.8) | (97.4–99.6) | (96.2–98.7) |
CI confidence interval, PPV positive predictive value, NPV negative predictive value
Fig. 1the algorithm with high sensitivity for identifying recurrence of breast cancer. “Yes” means the criteria was met; “No” means the criteria was not met
Fig. 2the algorithm with high positive predictive value for identifying recurrence of breast cancer. “Yes” means the criteria was met; “No” means the criteria was not met
Fig. 3the algorithm with high overall accuracy for identifying recurrence of breast cancer. “Yes” means the criteria was met; “No” means the criteria was not met