| Literature DB >> 30842343 |
Lihua Wu1,2, Yunliang Liu3, Jianman Wu4, Sheng Chen5, Shupin Tang2, Yi Jiang6, Pu Dai7,8.
Abstract
To investigate the possible association of pathogenic mutations of SLC26A4 and computerized tomography (CT) phenotypes of inner ear, and explore the feasibility of using the method of gene sequence analysis. A total of 155 patients with bilateral hearing loss carrying SLC26A4 gene mutations were further subjected to high-resolution temporal bone CT and thyroid B ultrasound tests. The potential relationship between the pathogenic mutations of gene and the CT phenotypes were analyzed. As a result, 65 patients (41.9%, 65/155) carried SLC26A4 gene mutations, and 27 cases were detected with pathogenic mutations of SLC26A4 where IVS7-2A>G (55.6%, 15/27) was the most common pathogenic mutation. Amongst them, 19 patients carrying bi-allelic SLC26A4 mutations were all confirmed to have inner ear malformation by CT scan including four cases of enlarged vestibular aqueduct (EVA) and 15 cases of Mondini dysplasia (MD). However, there was only one in eight cases of single allele pathogenic mutation who was confirmed to have EVA by CT scan. Further, only one patient with EVA was confirmed to be slightly higher of total T3 than normal by thyroid ultrasound scan and thyroid hormone assays. These findings suggested that CT detection and SLC26A4 gene detection are efficient methods to diagnose EVA, which can complement each other. Also, the bi-allelic pathogenic mutations of SLC26A4 are more likely to induce inner ear malformation than single allele pathogenic mutation.Entities:
Keywords: CT phenotype; SLC26A4 gene mutation; Sensorineural hearing loss
Mesh:
Substances:
Year: 2019 PMID: 30842343 PMCID: PMC6430729 DOI: 10.1042/BSR20182241
Source DB: PubMed Journal: Biosci Rep ISSN: 0144-8463 Impact factor: 3.840
Genotypes and CT phenotypes of the 64 patients with SLC26A4 gene mutations at Xiamen City Special Education Schools of deafness
| No. | Gender | Age (years) | Allele 1 | Allele 2 | TBCT | TBUS | TF | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleotide change | Mutation type or amino acid change | Characterization of variant | Nucleotide change | Mutation type or amino acid change | Characterization of variant | ||||||
| XT117 | F | 18 | c.754T>C | p.S252P | Pathogenic | c.1738_1739delAA | FS580, P606* | Pathogenic | IEVA | Nl | Nl |
| XT020 | M | 11 | c.916-917insG | FS306, P329* | Pathogenic | c.2168A>G | p.H723R | Pathogenic | IEVA | Nl | Nl |
| XT022 | F | 9 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | MD | Nl | Nl |
| XT102 | M | 15 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | MD | Nl | Nl |
| XT110 | F | 8 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | MD | Nl | Nl |
| XT162 | F | 8 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | MD | Nl | Nl |
| XT149 | M | 15 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | MD | Nl | Nl |
| XT063 | F | 11 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.1079C>T | p.A360V | Pathogenic | MD | Nl | Nl |
| XT066 | M | 15 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.1079C>T | p.A360V | Pathogenic | MD | Nl | Nl |
| XT147 | F | 18 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.1079C>T | p.A360V | Pathogenic | MD | Nl | Nl |
| XT010 | M | 11 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.2086C>T | p.Q696* | Pathogenic | MD | Nl | Nl |
| XT012 | F | 8 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.2086C>T | p.Q696* | Pathogenic | MD | Nl | Nl |
| XT148 | M | 13 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.1336C>T | p.Q446* | Pathogenic | IEVA | Nl | Nl |
| XT089 | F | 8 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.2007C>G | p.D669E | Pathogenic | IEVA | Nl | Nl |
| XT042 | M | 12 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.2168A>G | p.H723R | Pathogenic | MD | Nl | Nl |
| XT074 | M | 12 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | c.2168A>G | p.H723R | Pathogenic | MD | Nl | |
| XT126 | F | 17 | c.1079C>T | p.A360V | Pathogenic | c.1079C>T | p.A360V | Pathogenic | MD | Nl | Nl |
| XT121 | M | 10 | c.1229C>T | p.T410M | Pathogenic | c.2168A>G | p.H723R | Pathogenic | MD | Nl | Nl |
| XT155 | F | 14 | c.1692_1693insA | FS565, P573* | Pathogenic | c.2168A>G | p.H723R | Pathogenic | MD | Nl | Nl |
| XT047 | M | 11 | c.147C>G | p.S49R | Pathogenic | Nl | Nl | Nl | |||
| XT033 | F | 10 | c.IVS7-2A>G | Alteration of splicing sites | Pathogenic | IEVA | Nl | Total T3 higher | |||
| XT075 | M | 16 | c.1472T>C | p.I491T | Pathogenic | Nl | Nl | Nl | |||
| XT133 | F | 20 | c.1595G>T | p.S532I | Pathogenic | Nl | Nl | Nl | |||
| XT056 | M | 16 | c.IVS16-6G>A | Alteration of splicing sites | Pathogenic | Nl | Nl | Nl | |||
| XT085 | M | 16 | c.IVS16-6G>A | Alteration of splicing sites | Pathogenic | Nl | Nl | Nl | |||
| XT131 | F | 20 | c.IVS16-6G>A | Alteration of splicing sites | Pathogenic | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl |
| XT032 | M | 9 | c.1764_1765 insAGGAAAATA | Frameshift | Pathogenic | Nl | Nl | Nl | |||
| XT001 | F | 6 | c.2009T>C | p.V670A | Unkown | Nl | Nl | Nl | |||
| XT107 | M | 18 | c.2009T>C | p.V670A | Unkown | Not done | Not done | Not done | |||
| XT090 | F | 14 | c.IVS7-18T>G | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT076 | F | 18 | c.IVS7-18T>G | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT013 | M | 8 | c.IVS7-18T>G | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT079 | M | 22 | c.IVS7-18T>G | Alteration of splicing sites | Polymorphism | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl |
| XT015 | F | 10 | c.1167G>A | p.G389G | Silent varients | NL | NL | Nl | |||
| XT091 | F | 11 | c. IVS11+47T>C | Alteration of splicing sites | Polymorphism | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl |
| XT058 | F | 13 | c. IVS11+47T>C | Alteration of splicing sites | Polymorphism | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl |
| XT069 | M | 6 | c. IVS11+47T>C | Alteration of splicing sites | Polymorphism | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl |
| XT043 | M | 9 | c. IVS11+47T>C | Alteration of splicing sites | Polymorphism | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl |
| XT088 | M | 11 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT007 | F | 13 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT009 | F | 15 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT017 | F | 7 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT027 | M | 9 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT035 | M | 20 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT161 | M | 18 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT050 | F | 15 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT061 | F | 7 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT095 | F | 9 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT100 | M | 10 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT106 | M | 11 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT119 | M | 13 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT120 | F | 14 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT124 | F | 20 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT140 | F | 11 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT143 | M | 10 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT156 | M | 15 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT157 | M | 20 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT163 | F | 9 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT006 | F | 10 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT160 | F | 12 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT070 | M | 14 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
| XT103 | M | 15 | c.1790T>C | p.L597S | Polymorphism | Nl | Nl | Nl | |||
| XT116 | M | 9 | c.2283A>G | p.T761T | Polymorphism | Not done | Not done | Not done | |||
| XT104 | F | 11 | c.2283A>G | p.T761T | Polymorphism | Nl | Nl | Nl | |||
| XT105 | F | 12 | c.IVS11+47T>C | Alteration of splicing sites | Polymorphism | Nl | Nl | Nl | |||
Abbreviations: IEVA, isolated enlarged vestibular aqueduct; MD, Mondini dysplasia; TBCT, temporal bone CT; TBUS, thyroid B ultrasound; TF, thyroid function; Nl, normal; F, female; M, male.
*, termination codon.
Figure 1High-resolution temporal bone CT examination of the 63 patients with SLC26A4 mutation revealed MD in 15 patients
CT image examples: (A) axial and (B) coronal.
Figure 2High-resolution temporal bone CT images of 2 cases with SLC26A4 mutation revealed IEVA
Two cases ((A) patients XT148 and (B) XT089) of high-resolution temporal bone CT image; examples from 5 patients with IEVA in 63 patients with SLC26A4 mutation, based on the criteria of diameter greater than 1.5 mm between the outer of vestibular aqueduct and the vestibule of the total port foot or the midpoint of the isthmus.
Figure 3Schematic illustration of relationship between SLC26A4 mutations and CT phenotype
The 100% of bi-allelic SLC26A4 mutation can lead to inner ear malformation including 3 cases of IEVA and 12 cases of MD in this cohort, while only 1 of 8 cases of single allelic mutation resulted in IEVA.
Figure 4Correlation between CT phenotype, age, and gender of 27 patients with pathogenetic SLC26A4 mutation in 155 deaf children in Xiamen
There is no significant statistical difference between average age of IEVA (12 years) and MD (12.2 years) (P>0.1). And also there was no gender difference in this disease (female/male = 13/14). Nl, normal; IEVA, isolated enlarged vestibular aqueduct; MD, Mondini dysplasia.