Literature DB >> 30839882

Cooperative system analysis of the Ebola virus epidemic model.

Karima Kabli1, Soumia El Moujaddid1, Khadija Niri1, Abdessamad Tridane2.   

Abstract

This paper aims to study the global stability of an Ebola virus epidemic model. Although this epidemic ended in September 2015, it devastated several West African countries and mobilized the international community. With the recent cases of Ebola in the Democratic Republic of the Congo (DRC), the threat of the reappearance of this fatal disease remains. Therefore, we are obligated to be prepared for a possible re-emerging of the disease. In this work, we investigate the global stability analysis via the theory of cooperative systems, and we determine the conditions that lead to global stability diseases free and endemic equilibrium.

Entities:  

Keywords:  Basic reproduction number; Cooperative systems; Ebola virus; Global stability; Varying population size

Year:  2018        PMID: 30839882      PMCID: PMC6326236          DOI: 10.1016/j.idm.2018.09.004

Source DB:  PubMed          Journal:  Infect Dis Model        ISSN: 2468-0427


Introduction

The Ebola Virus Disease (EVD) is a type of hemorrhagic fever caused by an infection from a virus of the filoviridae family. Since 1976, five species of this virus have been identified; the most recent virus that caused the 2014–2015 outbreak in West Africa is one of them. This recent epidemic has been the deadliest with 28514 cases and 11313 deaths (Center for Disease Contro, 2014). The case fatality rate of this outbreak has been different in different affected countries with Guinea (), Liberia (), and Sierra Leone () (World Health Organization, 2017). The natural host of the virus and how humans get infected by the virus, in the first place (World Health Organization, 2015), are among the many issues that have not yet been understood regarding this virus. The human-human infection, can happen in several ways such as via direct contact with body fluids of an infected person, contaminated needles, sexual contact (Johns Hopkins Medicine He), and direct contact with a dead person in funeral rites (Manguvo & Mafuvadze, 2015). Mathematical modeling of the EVD has been the subject of many papers that attempted to study the epidemiological aspects of this disease or its dynamical aspects (Agusto, 2017; Althaus, 2014; Berge, Lubuma, Moremedi, Morris, & Kondera-Shava, 2017; Bodine, Cook, & Shorten, 2018; Browne, Gulbudak, & Webb, 2015; Chowell & Nishiura, 2014; Legrand, Freeman Grais, Boelle, Valleron, & Antoine, 2007; Vittoria Barbarossa et al., 2015; Webb & Browne, 2016; Weitz and Dushoff, 2015; Wong, Bui, Chughtai, & Macintyre, 2017). From an epidemiological point of view, mathematical models were used to estimate the basic reproduction number (Althaus, 2014; Bodine et al., 2018; Browne et al., 2015; Legrand et al., 2007; Wong et al., 2017), find the final epidemic size (Vittoria Barbarossa et al., 2015), estimate the effectiveness of interventions during the outbreak (Chowell & Nishiura, 2014), and finally to determine the control measure that stopped the spread from the dead bodies infected by the EVD (Weitz and Dushoff, 2015). On the other hand, the mathematical analysis the dynamic of the EVD models was investigated in (Agusto, 2017; Berge et al., 2017; Webb & Browne, 2016) by considering constant recruitment rate of the population (Agusto, 2017; Berge et al., 2017), where the standard Lyapunov approach was used to prove the global stability. The disease age density was also used to fit the data of the West African outbreak (Webb & Browne, 2016). In this work, we propose a deterministic model to describe the spread the EVD that includes a non-constant recruitment of the population. The idea behind this assumption is the fact that the fertility rate in the African countries in general, and the countries which were infected by the recent outbreak in particular, is very high. Therefore, in order to have a better understanding of the dynamic of the disease in the coming years, we have to consider a non-constant recruitment of the population. With such an assumption, the considered model becomes a cooperative system. The literature of cooperative dynamical systems is very rich. Muller (Müller, 1927) and Kamke (Kamke, 1932) were the first to apply monotone methods to differential equations. Later, Hirsch applied these results to dynamical systems and proved several results in this theory (Hirsch, 1982, 1983; Hirsch, 1990). The work of Smith and his collaborators (Smith & Thieme, 1990, 1991; Hirsch & Smith, 2005; Smith, 2008) improved the results of the Hirsch and used the theory of cooperative and irreducible systems in different types of ODEs with applications to biological systems. The application of the theory of cooperative systems in the epidemiological model is given in (Iggidr, Niri, & Moulay Ely, 2010), more recent works in (Niri, Kabli, & El moujaddid, 2015), and an epidemiological model with delay in (El Karkri & Niri, 2014; Niri & El Karkri, 2015). We apply this theory to study the stability of the model of Ebola by showing that the theory of cooperative and irreducible systems could be an alternative to Lyapunov functions. This paper is organized as follows: In the next section, section 2, we present the EVD model. The preliminary results of our analysis are in section 3, where we prove that the system is cooperative and irreducible, and we calculated the two disease thresholds, including the basic reproduction number. The local stability analysis is also given in this section. In section 4, we prove our main result: sufficient conditions of global stability for the endemic disease equilibrium. In Section 5, we present numerical simulations and support our results. Finally, the conclusion is given in Section 6, and Appendix is in Section A.

Introduction of the model

We adopted the model of Legrand et al. (Legrand et al., 2007) by ignoring the class of people that are dead but not yet buried. Ignoring such a class can be accepted as a modeling convention because the problem of the infection between people and the dead bodies before being buried was identified and controlled by the international community in their intervention to stop the spread of the disease via this route (Manguvo & Mafuvadze, 2015; WONG et al., 2017). Hence, our model described by the flow diagram in Fig. 1 is given bywhere S is susceptible individuals, E is a class of exposed people by the close contacts with infectious individuals; and people in E could become infectious after an incubation period. Once people in E become infectious, they are moved to A proportion of infected people might be hospitalized and hence moved to H. The infected untreated people in I and the infected hospitalized patients in H may die or recover and hence moved to R. is the total population. Note that the population growth is proportional to the total population as expressed in in (1). Hence, we have a varying total population size. Table 1 gives the definition of all the parameters used in the model.
Fig. 1

An SEIHR model for Ebola virus disease.

Table 1

Parameters used in the model.

ParameterDescription
αBirth rate
μNatural death
βIContact rate between susceptible and infected individuals
βHContact rate between susceptible and hospitalized individuals
1/σIncubation period
1/μHTime until hospitalization
μRRecovery rate of infectious people
μ'RRecovery rate of hospitalized people
μQDeath rate due to infection
μDeath rate due to infection in hospital
An SEIHR model for Ebola virus disease. Parameters used in the model. To proceed with our analysis, we made the following accepted assumptions: The contact rate between susceptible and infected individuals is always superior to death rate due to infection . The contact rate between susceptible and hospitalized individuals is always superior to death rate due to infection at the hospital . These assumptions will help us to prove the uniqueness of the endemic equilibrium point.

Preliminary analysis

The dimensionless form of the model (1) is given bywith In the rest of the paper we will study the system (2) in the positively invariant convex set:and formulate our results accordingly. The system (2) has others properties which play a key role in our analysis. That is system (2) is cooperative; this means that an increase in any compartment causes an increase of the growth rates of all the other compartments. The system (2) is cooperative and irreducible on . Proof The system is cooperative if the sign of the off diagonal of its Jacobian matrix is positive (see (Smith, 2008), p 34). By replacing i by and h by in the first equation, and e in the second equation by then the Jacobian matrix of the system (2) becomeswhere We can write the matrix the following form to see the sign of each termwhere * represents the terms on the main diagonal. It is easy to see that the Jacobian matrix is irreducible, and hence the system (2) is irreducible.

Positivity of solutions

The next result shows that the solutions for the system are well-defined and are non-negative. All solutions of the system (2) starting from non-negative initial conditions exist for all and remain non-negative. Furthermore, if , then Proof Since the system (2) is cooperative and irreducible, then it’s strongly monotone (Hirsch, 1985; Smith, 2008). Thus, we can confirm that for each initial condition corresponds a solution . Suppose that if , and there is a such that for , and Using the third equation in system (2) Then Since we have Thus which is a contradiction. This implies that such a cannot exist, thus for all .

Calculation of the basic reproduction number

The basic reproduction number is the expected number of secondary infected people contacted by a single infectious person. In the following, we calculate of (2) using the method described in (Van den DriesscheJames, 2002). Let Then, Following the same approach as (Van den DriesscheJames, 2002), we obtain,Hence, Note that where is the reproduction number if there is no contact with hospitalized people and is the reproduction number if there is contact just with the hospitalized individuals. The basic reproduction number of system (1) is similarly calculated as follows: By assuming that , it is easy to see that In fact, this result is straightforward since the function f is defined byis a decreasing function on and and

Local stability of disease free equilibrium point

The aim of this section is to investigate the local stability of free equilibrium of the system (2). Clearly the system (2) has the disease free equilibrium given by . (i) If , then the disease-free equilibrium is locally asymptotically stable. (ii) If , then is unstable Proof Since the variable r does not intervene in the first 4 equations, then we reduce the system (2) to a system of four equations, and we can get r by . Therefore, the system (2) is equivalent to: The Jacobian matrix of system (2) at is given by The characteristic equation is given by It is clear that is a root of (9), and we can solvewhere In terms of Routh-Hurwitz criterion (Gradshteyn & Ryzhik, 2000), it is sufficient to show that We have Then Thus From (11) if we have Since , and if then , and are positive. Moreover, we can easily see that Therefore, by the Routh-Hurwitz criterion, all roots of (10) have negative real parts, concluding that if , then is locally asymptotically stable. If then , and we have as . Therefore, there exists at least one positive root of the polynomial . Moreover, the equilibrium is unstable if .

Existence and uniqueness of the endemic equilibrium point

The system (1) has an infinity equilibrium points with positive components. Proof To find the endemic disease equilibrium of system (2), we solve the system: Which gives Let's havewiththen we have the following result.with 1. If , then is an endemic equilibrium point of the system (2), it belongs to , with 2. If , then the system (2) has only a disease-free equilibrium. Let Let's take and , with From the system (2), the vector field can be writing on the form: If is an equilibrium point of the system (1). Then we have: Our goal is to prove that is an equilibrium point of system (2), which means We have: Using the first and the last equations of (16), we haveand Which concludes that Similarly, we obtained,and conclude that Thus is an equilibrium of system (2). In addition, it is clear that . To find the endemic equilibrium point of system (2), we solve the following equations From the third and fourth equations of the system (17), we have Next, we replace and in the second equation of the system (17) and we get Now, we sum up the first and second equations of the system (17) and we divide on to get Using equation (18) and the following notationswe obtain Which concludes (15). 2. Since then implies that the system (2) has only a disease-free equilibrium. Before proving the uniqueness of an endemic equilibrium point, we need to give the following results (Smith, 2008):For an autonomous system of ordinary differential equations f is said to be of type K in D if for each for any two points a and b in D satisfying and Hence, if such that ; then for . Moreover, if D is a p-convex and ; , , then f is of type K in D. The endemic equilibrium point of the system (2) is unique. Proof By contradiction, let assume that and be the two endemic equilibrium points such that and in particular, Let then . Since the system in (2) is cooperative, f is type K, where and represents the right-hand side of the system in (2) such that Hence On the other hand, by substituting and in of (2), we find that Since then , which contradicts to . By the same token, when we suppose that we will find that , which contradicts Thus, . Suppose and let , then . Using the fact that for , we have Since , we have . Thus which contradicts . If we assume using the same terminology, we can find, , again we deduce that .Since,and we have and , it is easy to see that . Back to the first equation of (2), We have . Using the fact that, , we conclude , and therefore .

Global stability of equilibrium

In order to prove the global stability results, we first prove the following theorems. Let be a convex subset of Assume that system (20) is cooperative and irreducible in , and all solutions of (20) are bounded in . If there is one equilibrium, it attracts all solutions. So this unique equilibrium is globally asymptotically stable. Assume that there are two equilibria p and q not ordered and simple. Then if p is unstable, q attracts all solutions. So, The Proof of this result is in the Appendix. Using the fact that the system (2) is cooperative and irreducible on the set which is convex and positively invariant set, we first prove the global stability of as follows. In the next result, we give sufficient conditions that allow all solutions to converge to the disease free equilibrium or the disease endemic equilibrium. For this purpose, we use the following definition: An equilibrium is called simple if with is the Jacobian matrix. i) If , then is a simple equilibrium. ii)The disease free equilibrium is a simple equilibrium. Proof i) In order to show that is a simple equilibrium, we need to show , which is equivalent to showing that The Jacobian matrix of the system (2) at is given by: Using the elementary row operation, we get Withandand Using the fact that and , we can easily show that . Similarly, since and , we have On the other hand Hence, to show that is equivalent to showing that . By the form of E it suffices to show that . We have, With g is a function defined on by It's obvious that g is an increasing function on I and Since and , then , which gives . Thus , and which implies . Therefore, , which conclude that is a simple equilibrium of system (2). ii) We can remark from the Proof of Theorem 3 i) that if , then and consequently . It is easy to notice that the condition can be written as Clearly, this can not be true except if the birth rate α is significantly large. a) If , the disease free equilibrium is globally asymptotically stable in . b) If and , there are two cases: , then the disease free equilibrium is globally asymptotically stable, and the disease endemic equilibrium is unstable. , then the disease free equilibrium is unstable, and the disease endemic equilibrium is globally asymptotically stable. Proof a) If , then . Hence, the set of equilibrium consists of one point which is locally asymptotically stable. Moreover, from lemma 1 (a), all solutions with initial value in converge to . Therefore is globally asymptotically stable in . b) To prove b), we will use Definition 2 and Proposition 4, recall that . Suppose , there are two cases: If , the two equilibrium points and exists. We have then the disease free equilibrium is globally asymptotically stable. Since system (2) is cooperative and irreducible and equilibriums are simple then the disease endemic equilibrium is unstable. If , then from Theorem 2 the disease free equilibrium is unstable, and then from Proposition 4, is stable.

Numerical simulation

In this section, we present the numerical simulations of our findings using parameters which are taken from the 2014 West Africa Ebola Outbreak (Rivers, Lofgren, Marathe, Stephen, & Lewis, 2014) (see Table 2). The parameters were fit to the data of the outbreak of Liberia and Sierra Leone as follows.
Table 2

The parameters values obtained from fitting the epidemic model (Rivers et al., 2014) to the data of the Ebola in Liberia and Sierra Leone, 2014

ParameterLiberia Fitted ValuesSierra Leone Fitted Values
βI0.1600.128
βH0.0620.080
1/σ12 days10 days
1/μH3.24 days4.12 days
μR1/151/20
μ'R1/15.881/15.88
μQ1/131/10.38
μ'1/10.071/6.26
The parameters values obtained from fitting the epidemic model (Rivers et al., 2014) to the data of the Ebola in Liberia and Sierra Leone, 2014 With , the basic infection reproduction number in Liberia is and in Sierra Leone . By using Theorem 4, we deduce that is globally asymptotically stable. Numerical simulation illustrates our results see Fig. 2.
Fig. 2

The time series of the model 2 using the parameters of the fitted data from Liberia and Sierra Leone in Table 2.

The time series of the model 2 using the parameters of the fitted data from Liberia and Sierra Leone in Table 2. By choosing the following set of parameters, . We have and , we get the time series presented in Fig. 3.
Fig. 3

The time series of the model 2 using the parameters that give and convergence to the disease equilibrium.

The time series of the model 2 using the parameters that give and convergence to the disease equilibrium. With this set of data and by taking the initial condition , it is clearly shown that the disease persists. In fact, the hospitalized and recovered people are below (hospitalized and recovered ). The exposed people reach , the susceptible population does not exceed , while the infected people reach almost one third of the population . We should also notice that the disease equilibrium is reached faster compared to the disease free equilibrium.

Conclusion an discussion

The Ebola Virus Disease (EVD) is one the most devastating virus the infected the African continent in recent years. As the threat of this diseases reminds, it important to have a clear understanding of the dynamic of the disease. In this work, we presented a mathematical model of the spread of Ebola epidemic. The model is adapted from Legrand et al. (Legrand et al., 2007), where the parameters of the model were estimated from the recent Ebola outbreak (2014–2015). Using the monotone system theory in this work, is an alternative to the standard approach of analyzing the mathematical models of epidemiological systems. First, we proved that the proportion population model (2) is cooperative and irreducible on a positively invariant convex set. Using the next generation population approach, we found the basic reproduction number of the population proportions model. We notice that the basic reproduction number of the original model, was bigger . To show the local stability of the disease-free equilibrium (DFE), we used the Routh-Hurwitz criterion, and for the DEE, we proved the uniqueness via type K propriety and the fact that the system (2) is cooperative. To prove the global stability of the DFE, we showed, in Lemma 1 (a), that if the system is cooperative, irreducible and all its solutions are bounded, then the unique equilibrium is globally asymptotically stable. For the global stability of the disease-endemic equilibrium (DEE), we found the condition that made this equilibrium simple, and with the threshold condition, , we ensured the global stability of DEE. Our simulation was performed, using the most recent outbreak data, showed the global stability of the DFE. To illustrate the global stability of DEE, we choose a set of parameters that verified the simple equilibrium condition and the threshold condition. As we mentioned in Remark 2, the condition holds if the birth rate α is significantly large. In fact, the countries that were affected by the Ebola outbreak are among the highest birth rate in the African continent, 4.52 births per woman in Sierra Leone and 4.65 in Liberia (world bank data). This shows that although the basic reproduction number of the Ebola virus was above one (Althaus, 2014) in the recent outbreak (for example Sierra Leone 2.53 and Liberia 1.59), the fact that these countries have high birth rate has contributed to the outbreak. Moreover, the Ebola will continue to be a treat to these countries if the virus gains ground in the future.
  14 in total

1.  Reproduction numbers and sub-threshold endemic equilibria for compartmental models of disease transmission.

Authors:  P van den Driessche; James Watmough
Journal:  Math Biosci       Date:  2002 Nov-Dec       Impact factor: 2.144

2.  Modeling contact tracing in outbreaks with application to Ebola.

Authors:  Cameron Browne; Hayriye Gulbudak; Glenn Webb
Journal:  J Theor Biol       Date:  2015-08-18       Impact factor: 2.691

3.  Understanding the dynamics of Ebola epidemics.

Authors:  J Legrand; R F Grais; P Y Boelle; A J Valleron; A Flahault
Journal:  Epidemiol Infect       Date:  2006-09-26       Impact factor: 2.451

4.  Estimating the Reproduction Number of Ebola Virus (EBOV) During the 2014 Outbreak in West Africa.

Authors:  Christian L Althaus
Journal:  PLoS Curr       Date:  2014-09-02

5.  Modeling the impact of interventions on an epidemic of ebola in sierra leone and liberia.

Authors:  Caitlin M Rivers; Eric T Lofgren; Madhav Marathe; Stephen Eubank; Bryan L Lewis
Journal:  PLoS Curr       Date:  2014-11-06

6.  A model of the Ebola epidemics in West Africa incorporating age of infection.

Authors:  G F Webb; C J Browne
Journal:  J Biol Dyn       Date:  2016       Impact factor: 2.179

7.  Modeling post-death transmission of Ebola: challenges for inference and opportunities for control.

Authors:  Joshua S Weitz; Jonathan Dushoff
Journal:  Sci Rep       Date:  2015-03-04       Impact factor: 4.379

8.  Transmission Dynamics and Final Epidemic Size of Ebola Virus Disease Outbreaks with Varying Interventions.

Authors:  Maria Vittoria Barbarossa; Attila Dénes; Gábor Kiss; Yukihiko Nakata; Gergely Röst; Zsolt Vizi
Journal:  PLoS One       Date:  2015-07-21       Impact factor: 3.240

Review 9.  Transmission dynamics and control of Ebola virus disease (EVD): a review.

Authors:  Gerardo Chowell; Hiroshi Nishiura
Journal:  BMC Med       Date:  2014-10-10       Impact factor: 8.775

10.  The impact of traditional and religious practices on the spread of Ebola in West Africa: time for a strategic shift.

Authors:  Angellar Manguvo; Benford Mafuvadze
Journal:  Pan Afr Med J       Date:  2015-10-10
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