Literature DB >> 30839294

Neutron crystallographic study of heterotrimeric glutamine amidotransferase CAB.

Long Li1, Motoyasu Adachi2, Jian Yu1, Koji Kato1, Akira Shinoda3, Andreas Ostermann4, Tobias E Schrader5, Toyoyuki Ose1, Min Yao1.   

Abstract

Heterotrimeric glutamine amidotransferase CAB (GatCAB) possesses an ammonia-self-sufficient mechanism in which ammonia is produced and used in the inner complex by GatA and GatB, respectively. The X-ray structure of GatCAB revealed that the two identified active sites of GatA and GatB are markedly distant, but are connected in the complex by a channel of 30 Å in length. In order to clarify whether ammonia is transferred through this channel in GatCAB by visualizing ammonia, neutron diffraction studies are indispensable. Here, GatCAB crystals were grown to approximate dimensions of 2.8 × 0.8 × 0.8 mm (a volume of 1.8 mm3) with the aid of a polymer using microseeding and macroseeding processes. Monochromatic neutron diffraction data were collected using the neutron single-crystal diffractometer BIODIFF at the Heinz Maier-Leibnitz Zentrum, Germany. The GatCAB crystals belonged to space group P212121, with unit-cell parameters a = 74.6, b = 94.5, c = 182.5 Å and with one GatCAB complex (molecular mass 119 kDa) in the asymmetric unit. This study represented a challenge in current neutron diffraction technology.

Entities:  

Keywords:  GatCAB; ammonia channel; ammonia-self-sufficient mechanism; glutamine amidotransferase CAB; neutron diffraction

Mesh:

Substances:

Year:  2019        PMID: 30839294      PMCID: PMC6404854          DOI: 10.1107/S2053230X19000220

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


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