Literature DB >> 30834412

Subunit-subunit interactions play a key role in the heme-degradation reaction of HutZ from Vibrio cholerae.

Takeshi Uchida1, Kazuki Ota, Yukari Sekine, Nobuhiko Dojun, Koichiro Ishimori.   

Abstract

HutZ, a dimeric protein, from Vibrio cholerae is a protein that catalyzes the oxygen-dependent degradation of heme. Interestingly, the ascorbic acid-supported heme-degradation activity of HutZ depends on pH: less than 10% of heme is degraded by HutZ at pH 8.0, but nearly 90% of heme is degraded at pH 6.0. We examined here pH-dependent conformational changes in HutZ using fluorescence spectroscopy. Trp109 is estimated to be located approximately 21 Å from heme and is present in a different subunit containing a heme axial ligand. Thus, we postulated that the distance between heme and Trp109 reflects subunit-subunit orientational changes. On the basis of resonance energy transfer from Trp109 to heme, we estimated the distance between heme and Trp109 to be approximately 17 Å at pH 8.0, while the distance increased by less than 2 Å at pH 6.0. We presumed that such changes led to a decrease in electron donation from the proximal histidine, resulting in enhancement of the heme-degradation activity. To confirm this scenario, we mutated Ala31, located at the dimer interface, to valine to alter the distance through the subunit-subunit interaction. The distance between heme and Trp109 for the A31V mutant was elongated to 24-27 Å. Although resonance Raman spectra and reduction rate of heme suggested that this mutation resulted in diminished electron donation from the heme axial ligand, ascorbic acid-supported heme-degradation activity was not observed. Based on our findings, it can be proposed that the relative positioning of two protomers is important in determining the heme degradation rate by HutZ.

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Year:  2019        PMID: 30834412     DOI: 10.1039/c9dt00604d

Source DB:  PubMed          Journal:  Dalton Trans        ISSN: 1477-9226            Impact factor:   4.390


  2 in total

1.  Ionic bond in hydrogen transferring of the ferrous and/or ferric human/mouse verdoheme oxygenase.

Authors:  Hamideh Tasharofi; Maryam Daghighi Asli; Parisa Rajabali Jamaat
Journal:  J Mol Model       Date:  2021-05-20       Impact factor: 1.810

2.  HutZ is required for biofilm formation and contributes to the pathogenicity of Edwardsiella piscicida.

Authors:  Yan-Jie Shi; Qing-Jian Fang; Hui-Qin Huang; Chun-Guang Gong; Yong-Hua Hu
Journal:  Vet Res       Date:  2019-10-02       Impact factor: 3.683

  2 in total

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