Literature DB >> 30830402

Crop metabolomics: from diagnostics to assisted breeding.

Saleh Alseekh1,2, Luisa Bermudez3,4, Luis Alejandro de Haro3,5, Alisdair R Fernie1,2, Fernando Carrari6,7,8,9.   

Abstract

BACKGROUND: Until recently, plant metabolomics have provided a deep understanding on the metabolic regulation in individual plants as experimental units. The application of these techniques to agricultural systems subjected to more complex interactions is a step towards the implementation of translational metabolomics in crop breeding. AIM OF REVIEW: We present here a review paper discussing advances in the knowledge reached in the last years derived from the application of metabolomic techniques that evolved from biomarker discovery to improve crop yield and quality. KEY SCIENTIFIC CONCEPTS OF REVIEW: Translational metabolomics applied to crop breeding programs.

Keywords:  Crop plant breeding; Mass spectrometry; Metabolic traits; Nuclear magnetic resonance spectroscopy; Translational metabolomics

Mesh：

Year:  2018        PMID： 30830402     DOI： 10.1007/s11306-018-1446-5

Source DB:  PubMed          Journal:  Metabolomics        ISSN： 1573-3882            Impact factor:   4.290


  131 in total

1.  Genetic analysis of the metabolome exemplified using a rice population.

Authors:  Liang Gong; Wei Chen; Yanqiang Gao; Xianqing Liu; Hongyan Zhang; Caiguo Xu; Sibin Yu; Qifa Zhang; Jie Luo
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-20       Impact factor: 11.205

2.  An integrative overview of the molecular and physiological responses of sugarcane under drought conditions.

Authors:  Camilo Elber Vital; Andrea Giordano; Eduardo de Almeida Soares; Thomas Christopher Rhys Williams; Rosilene Oliveira Mesquita; Pedro Marcus Pereira Vidigal; Amanda de Santana Lopes; Túlio Gomes Pacheco; Marcelo Rogalski; Humberto Josué de Oliveira Ramos; Marcelo Ehlers Loureiro
Journal:  Plant Mol Biol       Date:  2017-04-13       Impact factor: 4.076

3.  Metabolomic Assessment of Key Maize Resources: GC-MS and NMR Profiling of Grain from B73 Hybrids of the Nested Association Mapping (NAM) Founders and of Geographically Diverse Landraces.

Authors:  Tyamagondlu V Venkatesh; Alexander W Chassy; Oliver Fiehn; Sherry Flint-Garcia; Qin Zeng; Kirsten Skogerson; George G Harrigan
Journal:  J Agric Food Chem       Date:  2016-03-07       Impact factor: 5.279

4.  Hydrophilic antioxidants from Andean tomato landraces assessed by their bioactivities in vitro and in vivo.

Authors:  Romina D Di Paola Naranjo; Santiago Otaiza; Alejandra C Saragusti; Veronica Baroni; Andrea Del V Carranza; Iris E Peralta; Estela M Valle; Fernando Carrari; Ramón Asis
Journal:  Food Chem       Date:  2016-03-09       Impact factor: 7.514

5.  Characterization of metabolite quantitative trait loci and metabolic networks that control glucosinolate concentration in the seeds and leaves of Brassica napus.

Authors:  Ji Feng; Yan Long; Lei Shi; Jiaqin Shi; Guy Barker; Jinling Meng
Journal:  New Phytol       Date:  2011-10-04       Impact factor: 10.151

Review 6.  Using metabolomic approaches to explore chemical diversity in rice.

Authors:  Miyako Kusano; Zhigang Yang; Yozo Okazaki; Ryo Nakabayashi; Atsushi Fukushima; Kazuki Saito
Journal:  Mol Plant       Date:  2014-12-11       Impact factor: 13.164

Review 7.  Phenylpropanoids as naturally occurring antioxidants: from plant defense to human health.

Authors:  L G Korkina
Journal:  Cell Mol Biol (Noisy-le-grand)       Date:  2007-04-15       Impact factor: 1.770

8.  Nitrogen limitation and high density responses in rice suggest a role for ethylene under high density stress.

Authors:  Maksym Misyura; David Guevara; Sanjeena Subedi; Darryl Hudson; Paul D McNicholas; Joseph Colasanti; Steven J Rothstein
Journal:  BMC Genomics       Date:  2014-08-13       Impact factor: 3.969

9.  Identification of Conserved and Diverse Metabolic Shifts during Rice Grain Development.

Authors:  Chaoyang Hu; Takayuki Tohge; Shen-An Chan; Yue Song; Jun Rao; Bo Cui; Hong Lin; Lei Wang; Alisdair R Fernie; Dabing Zhang; Jianxin Shi
Journal:  Sci Rep       Date:  2016-02-10       Impact factor: 4.379

10.  Impact of Soil Warming on the Plant Metabolome of Icelandic Grasslands.

Authors:  Albert Gargallo-Garriga; Marta Ayala-Roque; Jordi Sardans; Mireia Bartrons; Victor Granda; Bjarni D Sigurdsson; Niki I W Leblans; Michal Oravec; Otmar Urban; Ivan A Janssens; Josep Peñuelas
Journal:  Metabolites       Date:  2017-08-23
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  8 in total

1.  Editorial: Metabolomics in Crop Research-Current and Emerging Methodologies.

Authors:  Marta Sousa Silva; Carlos Cordeiro; Ute Roessner; Andreia Figueiredo
Journal:  Front Plant Sci       Date:  2019-08-02       Impact factor: 5.753

2.  Metabolomic Markers for the Early Selection of Coffea canephora Plants with Desirable Cup Quality Traits.

Authors:  Roberto Gamboa-Becerra; María Cecilia Hernández-Hernández; Óscar González-Ríos; Mirna L Suárez-Quiroz; Eligio Gálvez-Ponce; José Juan Ordaz-Ortiz; Robert Winkler
Journal:  Metabolites       Date:  2019-10-04

Review 3.  Promoting Human Nutrition and Health through Plant Metabolomics: Current Status and Challenges.

Authors:  Wenli Sun; Zican Chen; Jun Hong; Jianxin Shi
Journal:  Biology (Basel)       Date:  2020-12-31

4.  Widely-Targeted Metabolic Profiling in Lyciumbarbarum Fruits under Salt-Alkaline Stress Uncovers Mechanism of Salinity Tolerance.

Authors:  Xiaojie Liang; Yajun Wang; Yuekun Li; Wei An; Xinru He; Yanzhen Chen; Zhigang Shi; Jun He; Ru Wan
Journal:  Molecules       Date:  2022-02-26       Impact factor: 4.411

5.  Changes in Metabolic Profiles of Pea (Pisum sativum L.) as a Result of Repeated Short-Term Soil Drought and Subsequent Re-Watering.

Authors:  Lesław Bernard Lahuta; Joanna Szablińska-Piernik; Marcin Horbowicz
Journal:  Int J Mol Sci       Date:  2022-02-01       Impact factor: 5.923

Review 6.  Metabolomics based inferences to unravel phenolic compound diversity in cereals and its implications for human gut health.

Authors:  Rhowell Jr N Tiozon; Kristel June D Sartagoda; Luster May N Serrano; Alisdair R Fernie; Nese Sreenivasulu
Journal:  Trends Food Sci Technol       Date:  2022-09       Impact factor: 16.002

Review 7.  Genetic Improvement in Sunflower Breeding-Integrated Omics Approach.

Authors:  Milan Jocković; Siniša Jocić; Sandra Cvejić; Ana Marjanović-Jeromela; Jelena Jocković; Aleksandra Radanović; Dragana Miladinović
Journal:  Plants (Basel)       Date:  2021-06-04

8.  Metabolomics Analyses Provide Insights Into Nutritional Value and Abiotic Stress Tolerance in Halophyte Halogeton glomeratus.

Authors:  Juncheng Wang; Ke Yang; Lirong Yao; Zengke Ma; Chengdao Li; Erjing Si; Baochun Li; Yaxiong Meng; Xiaole Ma; Xunwu Shang; Huajun Wang
Journal:  Front Plant Sci       Date:  2021-07-05       Impact factor: 5.753
  8 in total

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