Literature DB >> 30824450

Population Structure and Morphotype Analysis of "Candidatus Accumulibacter" Using Fluorescence In Situ Hybridization-Staining-Flow Cytometry.

Chao Li1, Wei Zeng2, Ning Li1, Yu Guo1, Yongzhen Peng1.   

Abstract

"Candidatus Accumulibacter" is the dominant polyphosphate-accumulatinpan>g organpan>ism (PAO) inpan> denpan>itrifyinpan>g pan> class="Chemical">phosphorus removal (DPR) systems. In order to investigate the community structure and clade morphotypes of "Candidatus Accumulibacter" in DPR systems through flow cytometry (FCM), denitrifying phosphorus removal of almost 100% using nitrite and nitrate as the electron acceptor was achieved in sequencing batch reactors (SBRs). An optimal method of flow cytometry combined with fluorescence in situ hybridization and SYBR green I staining (FISH-staining-flow cytometry) was developed to quantify PAOs in DPR systems. By setting the width value of FCM, bacterial cells in a sludge sample were divided into three groups in different morphotypes, namely, coccus, coccobacillus, and bacillus. Average percentages that the three different PAO populations accounted for among total bacteria from SBR1 (SBR2) were 42% (45%), 14% (13%), and 4% (2%). FCM showed that the ratios of PAOs to total bacteria in the two reactors were 61% and 59%, and the quantitative PCR (qPCR) results indicated that IIC was the dominant "Candidatus Accumulibacter" clade in both denitrifying phosphorus removal systems, reaching 50% of the total "Candidatus Accumulibacter" bacteria. The subdominant clade in the reactor with nitrite as the electron acceptor was IID, accounting for 31% of the total "Candidatus Accumulibacter" bacteria. The FCM and qPCR results suggested that clades IIC and IID were both coccus, clade IIF was coccobacillus, and clade IA was bacillus. FISH analysis also indicated that PAOs were major cocci in the systems. An equivalence test of FCM-based quantification confirmed the accuracy of FISH-staining-flow cytometry, which can meet the quantitative requirements for PAOs in complex activated sludge samples.IMPORTANCE As one group of the most important functional phosphorus removal organisms, "Candidatus Accumulibacter," affiliated with the Rhodocyclus group of the Betaproteobacteria, is a widely recognized and studied PAO in the field of biological wastewater treatment. The morphotypes and population structure of clade-level "Candidatus Accumulibacter" were studied through novel FISH-staining-flow cytometry, which involved denitrifying phosphorus removal (DPR) achieving carbon and energy savings and simultaneous removal of N and P, thus inferring the different denitrifying phosphorus removal abilities of these clades. Additionally, based on this method, in situ quantification for specific polyphosphate-accumulating organisms (PAOs) enables a more efficient process and more accurate result. The establishment of FISH-staining-flow cytometry makes cell sorting of clade-level noncultivated organisms available.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  FISH-staining-flow cytometry; polyphosphate-accumulating organisms; quantitative PCR; “Candidatus Accumulibacter,” denitrifying phosphorus removal

Year:  2019        PMID: 30824450      PMCID: PMC6495755          DOI: 10.1128/AEM.02943-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  51 in total

1.  The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

Authors:  H Daims; A Brühl; R Amann; K H Schleifer; M Wagner
Journal:  Syst Appl Microbiol       Date:  1999-09       Impact factor: 4.022

Review 2.  Fluorescence in situ hybridization.

Authors:  Karen D Tsuchiya
Journal:  Clin Lab Med       Date:  2011-10-19       Impact factor: 1.935

3.  Flow cytometry for fast microbial community fingerprinting.

Authors:  Karen De Roy; Lieven Clement; Olivier Thas; Yingying Wang; Nico Boon
Journal:  Water Res       Date:  2011-12-08       Impact factor: 11.236

4.  Effect of pH reduction on polyphosphate- and glycogen-accumulating organisms in enhanced biological phosphorus removal processes.

Authors:  Toshikazu Fukushima; Motoharu Onuki; Hiroyasu Satoh; Takashi Mino
Journal:  Water Sci Technol       Date:  2010       Impact factor: 1.915

5.  Assessing the abundance and activity of denitrifying polyphosphate accumulating organisms through molecular and chemical techniques.

Authors:  Adrian Oehmen; Gilda Carvalho; Filomena Freitas; Maria A M Reis
Journal:  Water Sci Technol       Date:  2010       Impact factor: 1.915

6.  Effect of acetate to glycerol ratio on enhanced biological phosphorus removal.

Authors:  Guojing Yang; Dongbo Wang; Qi Yang; Jianwei Zhao; Yiwen Liu; Qilin Wang; Guangming Zeng; Xiaoming Li; Hailong Li
Journal:  Chemosphere       Date:  2017-12-28       Impact factor: 7.086

7.  Long-term performance evaluation of EBPR process in tropical climate: start-up, process stability, and the effect of operational pH and influent C:P ratio.

Authors:  Y H Ong; A S M Chua; B P Lee; G C Ngoh
Journal:  Water Sci Technol       Date:  2013       Impact factor: 1.915

8.  Enrichment, phylogenetic analysis and detection of a bacterium that performs enhanced biological phosphate removal in activated sludge.

Authors:  R P Hesselmann; C Werlen; D Hahn; J R van der Meer; A J Zehnder
Journal:  Syst Appl Microbiol       Date:  1999-09       Impact factor: 4.022

9.  Flow cytometry and adenosine tri-phosphate analysis: alternative possibilities to evaluate major bacteriological changes in drinking water treatment and distribution systems.

Authors:  Marius Vital; Marco Dignum; Aleksandra Magic-Knezev; Petra Ross; Luuk Rietveld; Frederik Hammes
Journal:  Water Res       Date:  2012-06-20       Impact factor: 11.236

10.  Long-term impact of anaerobic reaction time on the performance and granular characteristics of granular denitrifying biological phosphorus removal systems.

Authors:  Yayi Wang; Gang Guo; Hong Wang; Tom Stephenson; Jianhua Guo; Liu Ye
Journal:  Water Res       Date:  2013-06-15       Impact factor: 11.236

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