Literature DB >> 30823756

Effect of ethanol on insulin dimer dissociation.

Puja Banerjee1, Sayantan Mondal1, Biman Bagchi1.   

Abstract

Insulin-dimer dissociation is an essential biochemical process required for the activity of the hormone. We investigate this dissociation process at the molecular level in water and at the same time, in 5% and 10% water-ethanol mixtures. We compute the free energy surface of the protein dissociation processes by employing biased molecular dynamics simulation. In the presence of ethanol (EtOH), we observe a marked lowering in the free energy barrier of activation of dimer dissociation from that in the neat water, by as much as ∼50%, even in the 5% water-ethanol solution. In addition, ethanol is found to induce significant changes in the dissociation pathway. We extract the most probable conformations of the intermediate states along the minimum energy pathway in the case of all the three concentrations (EtOH mole fractions 0, 5, and 10). We explore the change in microscopic structures that occur in the presence of ethanol. Interestingly, we discover a stable intermediate state in the water-ethanol binary mixture where the centers of the monomers are separated by about 3 nm and the contact order parameter is close to zero. This intermediate is stabilized by the wetting of the interface between the two monomers by the preferential distribution of ethanol and water molecules. This wetting serves to reduce the free energy barrier significantly and thus results in an increase in the rate of dimer dissociation. We also analyze the solvation of the two monomers during the dissociation and both the proteins' departure from the native state configuration to obtain valuable insights into the dimer dissociation processes.

Entities:  

Year:  2019        PMID: 30823756     DOI: 10.1063/1.5079501

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  10 in total

1.  Dynamical control by water at a molecular level in protein dimer association and dissociation.

Authors:  Puja Banerjee; Biman Bagchi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-22       Impact factor: 11.205

2.  Revealing the Dynamical Role of Co-solvents in the Coupled Folding and Dimerization of Insulin.

Authors:  Xin-Xing Zhang; Andrei Tokmakoff
Journal:  J Phys Chem Lett       Date:  2020-05-19       Impact factor: 6.475

3.  Coacervation of poly-electrolytes in the presence of lipid bilayers: mutual alteration of structure and morphology.

Authors:  Sayantan Mondal; Qiang Cui
Journal:  Chem Sci       Date:  2022-06-16       Impact factor: 9.969

Review 4.  Quantitative molecular simulations.

Authors:  Kai Töpfer; Meenu Upadhyay; Markus Meuwly
Journal:  Phys Chem Chem Phys       Date:  2022-06-01       Impact factor: 3.945

5.  Stable Monomeric Insulin Formulations Enabled by Supramolecular PEGylation of Insulin Analogues.

Authors:  Caitlin L Maikawa; Anton A A Smith; Lei Zou; Catherine M Meis; Joseph L Mann; Matthew J Webber; Eric A Appel
Journal:  Adv Ther (Weinh)       Date:  2019-12-17

6.  Insulin Dissociates by Diverse Mechanisms of Coupled Unfolding and Unbinding.

Authors:  Adam Antoszewski; Chi-Jui Feng; Bodhi P Vani; Erik H Thiede; Lu Hong; Jonathan Weare; Andrei Tokmakoff; Aaron R Dinner
Journal:  J Phys Chem B       Date:  2020-06-25       Impact factor: 2.991

Review 7.  Progress in Simulation Studies of Insulin Structure and Function.

Authors:  Biswajit Gorai; Harish Vashisth
Journal:  Front Endocrinol (Lausanne)       Date:  2022-06-20       Impact factor: 6.055

8.  Counteractive Effects of Choline Geranate (CAGE) ILs and Ethanol on Insulin's Stability-A Leap Forward towards Oral Insulin Formulation.

Authors:  Kandhan Palanisamy; Muthuramalingam Prakash
Journal:  Molecules       Date:  2022-08-08       Impact factor: 4.927

9.  Unfolding bovine α-lactalbumin with T-jump: Characterizing disordered intermediates via time-resolved x-ray solution scattering and molecular dynamics simulations.

Authors:  Darren J Hsu; Denis Leshchev; Irina Kosheleva; Kevin L Kohlstedt; Lin X Chen
Journal:  J Chem Phys       Date:  2021-03-14       Impact factor: 3.488

10.  Thermodynamic Origin of Differential Excipient-Lysozyme Interactions.

Authors:  Jas Kalayan; Robin A Curtis; Jim Warwicker; Richard H Henchman
Journal:  Front Mol Biosci       Date:  2021-06-11
  10 in total

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