| Literature DB >> 30817802 |
Eugene Gonzalez-Lopez1, Yuka Kawasawa-Imamura1,2, Lijun Zhang2,3, Xuemei Huang1,4,5, Walter A Koltun6, Matthew D Coates7, Kent E Vrana1.
Abstract
Inflammatory bowel diseases (IBD) are associated with altered neuronal regulation of the gastrointestinal (GI) tract and release of norepinephrine (NE). As sympathetic innervation of the GI tract modulates motility, blood flow, and immune function, changes in NE signaling may alter the risk of developing IBD. Dopamine beta-hydroxylase (DβH), the enzyme responsible for NE production, has been suggested to play a critical role in IBD, however the exact mechanism is unknown. We hypothesized that genetic variants of DβH could increase the risk of IBD. We performed genetic analysis on 45 IBD patients and 74 controls. IBD patients were screened by targeted exome sequencing and compared with NeuroX DβH single nucleotide polymorphism (SNP) genotyping data of the controls. Serum DβH protein levels for 15 IBD patients and 13 controls were evaluated using immunoblots and competitive ELISA. Seven SNPs were observed from DβH targeted exome sequencing in the 45 IBD patients. A single non-synonymous SNP, rs6271 (Arg549Cys), had a significant association with IBD patients; the odds ratio was a 5.6 times higher SNP frequency in IBD patients compared to controls (p = 0.002). We also examined the function and availability of the protein in both the IBD and control patients' sera bearing DβH Arg549Cys. Both control and IBD subjects bearing the heterozygote allele had statistically lower DβH protein levels while the intrinsic enzyme activity was higher. This is the first report of a noradrenergic genetic polymorphism (rs6271; Arg549Cys) associated with IBD. This polymorphism is associated with significantly lower levels of circulating DβH.Entities:
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Year: 2019 PMID: 30817802 PMCID: PMC6394932 DOI: 10.1371/journal.pone.0210175
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Map of DβH gene with all exonic SNPs and rs# observed in the targeted deep sequencing of IBD patients.
Single nucleotide polymorphism (SNP) association analysis comparing IBD patients with control.
| RS# | Residue change | Minor allele | Risk Allele | MAF-IBD | MAF-Control | Odds | 95% Confidence Interval (Cl) | p-Value |
|---|---|---|---|---|---|---|---|---|
| R549C | C | T | 13.3 | 2.7 | 5.5385 | 1.7281 to 17.7501 | 0.0040 | |
| N578N | C | T | 1.11 | 0 | 4.9777 | 0.2006 to 123.5139 | 0.3273 | |
| E162E | A | G | 47.8 | 51.3 | 0.8667 | 0.5130 to 1.4643 | 0.5933 | |
| T470T | G | A | 48.9 | 45.7 | 1.1253 | 0.6659 to 1.9018 | 0.6592 | |
| G88A | G | C | 0 | 0.67 | 0.5433 | 0.0219 to 13.4801 | 0.7096 | |
| R79W | C | T | 0 | 0.67 | 0.5433 | 0.0219 to 13.4801 | 0.7096 | |
| D290N | G | A | 0 | 0.67 | 0.5433 | 0.0219 to 13.4801 | 0.7096 | |
| A211T | G | A | 3.33 | 4.05 | 0.8161 | 0.1990 to 3.3473 | 0.7778 | |
| A318S | G | T | 5.56 | 4.73 | 1.1849 | 0.3645 to 3.8514 | 0.7779 | |
| N201S | A | G | 1.1 | 1.35 | 0.8202 | 0.0733 to 9.1775 | 0.8722 |
IBD patient Identified by targeted exome sequencing
Control patient Identified by NeuroX SNP array analysis
* Confirmed by TaqMan genotyping assay
Enrichment between rs6271 genotype and clinical cases of IBD.
| Rs6271 | N (%) | N (%) | ||
| C/C (Wild-Type) (549Arg/Arg) | 34 (75%) | 70 (95%) | 0.0052 | 0.1771 (.0471-5243) |
| C/T (Heterozygote) (549Arg/Cys) | 10 (22%) | 4 (5%) | 0.0078 | 5.286 (1.6790–19.09) |
| T/T (Homozygote SNP) (549Cys/Cys) | 1 (2%) | 0 (0%) | N/A | |
| Rs6271 | N (%) | N (%) | ||
| C (Arginine) | 78 (87%) | 144 (97%) | 0.0029 | 0.1645 (0.052–0.523) |
| T (Cysteine) | 12 (13%) | 4 (2.7%) | 0.0029 | 5.5385 (1.917–19.27) |
CI = Confidence interval, OR = Odds ratio
*No Statistical Analysis Possible (n = 1)
Fig 2Expression results for DβH in sera from IBD subjects with different genotypes of Arg549Cys.
(A) The relative expression levels of DβH among wild-type, heterozygous and homozygous IBD sera. Numbers at the top refer to patient designators. (B) The relative expression levels of DβH controlled for transferrin among wild-type, heterozygous and homozygous IBD serums. Overall comparison of wild-type and heterozygous subject sera are shown as mean±SEM (p = 0.0091; as measured with unpaired t-test). C) The distribution of DβH quantity in both study cohorts as estimated from ELISA assays. Based on the ELISA, heterozygotes for Arg549Cys display lower circulating DβH compared to wildtype in both Control (p = 0.0056) and IBD (p = 0.0001).
Fig 3The levels of conversion of tyramine to octopamine in serum samples from IBD and control subjects with different genotypes.
Relative activities after normalization to the DΒH expression levels measured by ELISA and represented in Fig 2. Overall comparison of wildtype and heterozygotes subject serum conversion of tyramine to octopamine (normalized to the amount of DΒH present; quantified as pmol/min/pg DβH, measured with an unpaired t-test).