Literature DB >> 30817158

A Novel Metabolic Signature To Predict the Requirement of Dialysis or Renal Transplantation in Patients with Chronic Kidney Disease.

Helena U Zacharias1, Michael Altenbuchinger, Ulla T Schultheiss2,3, Claudia Samol, Fruzsina Kotsis2,3, Inga Poguntke2, Peggy Sekula2, Jan Krumsiek1,4, Anna Köttgen2, Rainer Spang, Peter J Oefner, Wolfram Gronwald.   

Abstract

Identification of chronic kidney disease patients at risk of progressing to end-stage renal disease (ESRD) is essential for treatment decision-making and clinical trial design. Here, we explored whether proton nuclear magnetic resonance (NMR) spectroscopy of blood plasma improves the currently best performing kidney failure risk equation, the so-called Tangri score. Our study cohort comprised 4640 participants from the German Chronic Kidney Disease (GCKD) study, of whom 185 (3.99%) progressed over a mean observation time of 3.70 ± 0.88 years to ESRD requiring either dialysis or transplantation. The original four-variable Tangri risk equation yielded a C statistic of 0.863 (95% CI, 0.831-0.900). Upon inclusion of NMR features by state-of-the-art machine learning methods, the C statistic improved to 0.875 (95% CI, 0.850-0.911), thereby outperforming the Tangri score in 94 out of 100 subsampling rounds. Of the 24 NMR features included in the model, creatinine, high-density lipoprotein, valine, acetyl groups of glycoproteins, and Ca2+-EDTA carried the highest weights. In conclusion, proton NMR-based plasma fingerprinting improved markedly the detection of patients at risk of developing ESRD, thus enabling enhanced patient treatment.

Entities:  

Keywords:  chronic kidney disease; kidney failure risk equation; metabolomics

Mesh:

Year:  2019        PMID: 30817158     DOI: 10.1021/acs.jproteome.8b00983

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  6 in total

1.  Impact of Using Risk-Based Stratification on Referral of Patients With Chronic Kidney Disease From Primary Care to Specialist Care in the United Kingdom.

Authors:  Harjeet K Bhachu; Paul Cockwell; Anuradhaa Subramanian; Nicola J Adderley; Krishna Gokhale; Anthony Fenton; Derek Kyte; Krishnarajah Nirantharakumar; Melanie Calvert
Journal:  Kidney Int Rep       Date:  2021-06-01

Review 2.  Prediction models used in the progression of chronic kidney disease: A scoping review.

Authors:  David K E Lim; James H Boyd; Elizabeth Thomas; Aron Chakera; Sawitchaya Tippaya; Ashley Irish; Justin Manuel; Kim Betts; Suzanne Robinson
Journal:  PLoS One       Date:  2022-07-26       Impact factor: 3.752

3.  Machine learning algorithms' accuracy in predicting kidney disease progression: a systematic review and meta-analysis.

Authors:  Nuo Lei; Xianlong Zhang; Mengting Wei; Beini Lao; Xueyi Xu; Min Zhang; Huifen Chen; Yanmin Xu; Bingqing Xia; Dingjun Zhang; Chendi Dong; Lizhe Fu; Fang Tang; Yifan Wu
Journal:  BMC Med Inform Decis Mak       Date:  2022-08-01       Impact factor: 3.298

Review 4.  Role of Artificial Intelligence in Kidney Disease.

Authors:  Qiongjing Yuan; Haixia Zhang; Tianci Deng; Shumei Tang; Xiangning Yuan; Wenbin Tang; Yanyun Xie; Huipeng Ge; Xiufen Wang; Qiaoling Zhou; Xiangcheng Xiao
Journal:  Int J Med Sci       Date:  2020-04-06       Impact factor: 3.738

5.  An R-Package for the Deconvolution and Integration of 1D NMR Data: MetaboDecon1D.

Authors:  Martina Häckl; Philipp Tauber; Frank Schweda; Helena U Zacharias; Michael Altenbuchinger; Peter J Oefner; Wolfram Gronwald
Journal:  Metabolites       Date:  2021-07-13

Review 6.  Chronic Kidney Disease Cohort Studies: A Guide to Metabolome Analyses.

Authors:  Ulla T Schultheiss; Robin Kosch; Fruzsina Kotsis; Michael Altenbuchinger; Helena U Zacharias
Journal:  Metabolites       Date:  2021-07-16
  6 in total

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