Literature DB >> 30815669

Deep learning for cardiovascular medicine: a practical primer.

Chayakrit Krittanawong1,2, Kipp W Johnson3, Robert S Rosenson2, Zhen Wang4,5, Mehmet Aydar6, Usman Baber2, James K Min7, W H Wilson Tang8,9,10, Jonathan L Halperin2, Sanjiv M Narayan11.   

Abstract

Deep learning (DL) is a branch of machine learning (ML) showing increasing promise in medicine, to assist in data classification, novel disease phenotyping and complex decision making. Deep learning is a form of ML typically implemented via multi-layered neural networks. Deep learning has accelerated by recent advances in computer hardware and algorithms and is increasingly applied in e-commerce, finance, and voice and image recognition to learn and classify complex datasets. The current medical literature shows both strengths and limitations of DL. Strengths of DL include its ability to automate medical image interpretation, enhance clinical decision-making, identify novel phenotypes, and select better treatment pathways in complex diseases. Deep learning may be well-suited to cardiovascular medicine in which haemodynamic and electrophysiological indices are increasingly captured on a continuous basis by wearable devices as well as image segmentation in cardiac imaging. However, DL also has significant weaknesses including difficulties in interpreting its models (the 'black-box' criticism), its need for extensive adjudicated ('labelled') data in training, lack of standardization in design, lack of data-efficiency in training, limited applicability to clinical trials, and other factors. Thus, the optimal clinical application of DL requires careful formulation of solvable problems, selection of most appropriate DL algorithms and data, and balanced interpretation of results. This review synthesizes the current state of DL for cardiovascular clinicians and investigators, and provides technical context to appreciate the promise, pitfalls, near-term challenges, and opportunities for this exciting new area. Published on behalf of the European Society of Cardiology. All rights reserved.
© The Author(s) 2019. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  Artificial intelligence; Big data; Cardiovascular medicine; Deep learning; Precision medicine

Year:  2019        PMID: 30815669      PMCID: PMC6600129          DOI: 10.1093/eurheartj/ehz056

Source DB:  PubMed          Journal:  Eur Heart J        ISSN: 0195-668X            Impact factor:   29.983


  63 in total

1.  Internal validation of predictive models: efficiency of some procedures for logistic regression analysis.

Authors:  E W Steyerberg; F E Harrell; G J Borsboom; M J Eijkemans; Y Vergouwe; J D Habbema
Journal:  J Clin Epidemiol       Date:  2001-08       Impact factor: 6.437

2.  Atrial activity enhancement by Wiener filtering using an artificial neural network.

Authors:  C Vásquez; A Hernández; F Mora; G Carrault; G Passariello
Journal:  IEEE Trans Biomed Eng       Date:  2001-08       Impact factor: 4.538

3.  ESC Guidelines for the management of grown-up congenital heart disease (new version 2010).

Authors:  Helmut Baumgartner; Philipp Bonhoeffer; Natasja M S De Groot; Fokko de Haan; John Erik Deanfield; Nazzareno Galie; Michael A Gatzoulis; Christa Gohlke-Baerwolf; Harald Kaemmerer; Philip Kilner; Folkert Meijboom; Barbara J M Mulder; Erwin Oechslin; Jose M Oliver; Alain Serraf; Andras Szatmari; Erik Thaulow; Pascal R Vouhe; Edmond Walma
Journal:  Eur Heart J       Date:  2010-08-27       Impact factor: 29.983

4.  Heart rate detection from single-foot plantar bioimpedance measurements in a weighing scale.

Authors:  Delia H Diaz; Oscar Casas; Ramon Pallas-Areny
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

5.  The nature of statistical learning theory~.

Authors:  V Cherkassky
Journal:  IEEE Trans Neural Netw       Date:  1997

6.  Assessing the goodness of fit of personal risk models.

Authors:  Gail Gong; Anne S Quante; Mary Beth Terry; Alice S Whittemore
Journal:  Stat Med       Date:  2014-04-22       Impact factor: 2.373

7.  Towards better clinical prediction models: seven steps for development and an ABCD for validation.

Authors:  Ewout W Steyerberg; Yvonne Vergouwe
Journal:  Eur Heart J       Date:  2014-06-04       Impact factor: 29.983

8.  Detection of atrial fibrillation using contactless facial video monitoring.

Authors:  Jean-Philippe Couderc; Survi Kyal; Lalit K Mestha; Beilei Xu; Derick R Peterson; Xiaojuan Xia; Burr Hall
Journal:  Heart Rhythm       Date:  2014-08-29       Impact factor: 6.343

9.  Addressing Missing Data Mechanism Uncertainty using Multiple-Model Multiple Imputation: Application to a Longitudinal Clinical Trial.

Authors:  Juned Siddique; Ofer Harel; Catherine M Crespi
Journal:  Ann Appl Stat       Date:  2012-12-01       Impact factor: 2.083

10.  Calibration plots for risk prediction models in the presence of competing risks.

Authors:  Thomas A Gerds; Per K Andersen; Michael W Kattan
Journal:  Stat Med       Date:  2014-03-25       Impact factor: 2.373

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  47 in total

1.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

Review 2.  Artificial Intelligence and Machine Learning in Cardiovascular Imaging.

Authors:  Karthik Seetharam; James K Min
Journal:  Methodist Debakey Cardiovasc J       Date:  2020 Oct-Dec

3.  Machine Learning to Classify Intracardiac Electrical Patterns During Atrial Fibrillation: Machine Learning of Atrial Fibrillation.

Authors:  Mahmood I Alhusseini; Firas Abuzaid; Albert J Rogers; Junaid A B Zaman; Tina Baykaner; Paul Clopton; Peter Bailis; Matei Zaharia; Paul J Wang; Wouter-Jan Rappel; Sanjiv M Narayan
Journal:  Circ Arrhythm Electrophysiol       Date:  2020-07-06

4.  Cardioinformatics: the nexus of bioinformatics and precision cardiology.

Authors:  Bohdan B Khomtchouk; Diem-Trang Tran; Kasra A Vand; Matthew Might; Or Gozani; Themistocles L Assimes
Journal:  Brief Bioinform       Date:  2020-12-01       Impact factor: 11.622

5.  Optical Mapping-Validated Machine Learning Improves Atrial Fibrillation Driver Detection by Multi-Electrode Mapping.

Authors:  Alexander M Zolotarev; Brian J Hansen; Ekaterina A Ivanova; Katelynn M Helfrich; Ning Li; Paul M L Janssen; Peter J Mohler; Nahush A Mokadam; Bryan A Whitson; Maxim V Fedorov; John D Hummel; Dmitry V Dylov; Vadim V Fedorov
Journal:  Circ Arrhythm Electrophysiol       Date:  2020-09-13

6.  A deep-learning system for the assessment of cardiovascular disease risk via the measurement of retinal-vessel calibre.

Authors:  Carol Y Cheung; Dejiang Xu; Ching-Yu Cheng; Charumathi Sabanayagam; Yih-Chung Tham; Marco Yu; Tyler Hyungtaek Rim; Chew Yian Chai; Bamini Gopinath; Paul Mitchell; Richie Poulton; Terrie E Moffitt; Avshalom Caspi; Jason C Yam; Clement C Tham; Jost B Jonas; Ya Xing Wang; Su Jeong Song; Louise M Burrell; Omar Farouque; Ling Jun Li; Gavin Tan; Daniel S W Ting; Wynne Hsu; Mong Li Lee; Tien Y Wong
Journal:  Nat Biomed Eng       Date:  2020-10-12       Impact factor: 25.671

7.  Decoding empagliflozin's molecular mechanism of action in heart failure with preserved ejection fraction using artificial intelligence.

Authors:  Antoni Bayes-Genis; Oriol Iborra-Egea; Giosafat Spitaleri; Mar Domingo; Elena Revuelta-López; Pau Codina; Germán Cediel; Evelyn Santiago-Vacas; Adriana Cserkóová; Domingo Pascual-Figal; Julio Núñez; Josep Lupón
Journal:  Sci Rep       Date:  2021-06-08       Impact factor: 4.379

Review 8.  Hyponatremia in Heart Failure: Pathogenesis and Management.

Authors:  Mario Rodriguez; Marcelo Hernandez; Wisit Cheungpasitporn; Kianoush B Kashani; Iqra Riaz; Janani Rangaswami; Eyal Herzog; Maya Guglin; Chayakrit Krittanawong
Journal:  Curr Cardiol Rev       Date:  2019

9.  Cardiovascular Disease Prediction by Machine Learning Algorithms Based on Cytokines in Kazakhs of China.

Authors:  Yunxing Jiang; Xianghui Zhang; Rulin Ma; Xinping Wang; Jiaming Liu; Mulatibieke Keerman; Yizhong Yan; Jiaolong Ma; Yanpeng Song; Jingyu Zhang; Jia He; Shuxia Guo; Heng Guo
Journal:  Clin Epidemiol       Date:  2021-06-09       Impact factor: 4.790

10.  Clinical Deployment of Explainable Artificial Intelligence of SPECT for Diagnosis of Coronary Artery Disease.

Authors:  Yuka Otaki; Ananya Singh; Paul Kavanagh; Robert J H Miller; Tejas Parekh; Balaji K Tamarappoo; Tali Sharir; Andrew J Einstein; Mathews B Fish; Terrence D Ruddy; Philipp A Kaufmann; Albert J Sinusas; Edward J Miller; Timothy M Bateman; Sharmila Dorbala; Marcelo Di Carli; Sebastien Cadet; Joanna X Liang; Damini Dey; Daniel S Berman; Piotr J Slomka
Journal:  JACC Cardiovasc Imaging       Date:  2021-07-14
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