Literature DB >> 30811189

Discovery of Hydroxylase Activity for PqqB Provides a Missing Link in the Pyrroloquinoline Quinone Biosynthetic Pathway.

Eric M Koehn1, John A Latham1, Tara Armand1, Robert L Evans2, Xiongying Tu2, Carrie M Wilmot2, Anthony T Iavarone1, Judith P Klinman1,3.   

Abstract

Understanding the biosynthesis of cofactors is fundamental to the life sciences, yet to date a few important pathways remain unresolved. One example is the redox cofactor pyrroloquinoline quinone (PQQ), which is critical for C1 metabolism in many microorganisms, a disproportionate number of which are opportunistic human pathogens. While the initial and final steps of PQQ biosynthesis, involving PqqD/E and PqqC, have been elucidated, the precise nature and order of the remaining transformations in the pathway are unknown. Here we show evidence that the remaining essential biosynthetic enzyme PqqB is an iron-dependent hydroxylase catalyzing oxygen-insertion reactions that are proposed to produce the quinone moiety of the mature PQQ cofactor. The demonstrated reactions of PqqB are unprecedented within the metallo β-lactamase protein family and expand the catalytic repertoire of nonheme iron hydroxylases. These new findings also generate a nearly complete description of the PQQ biosynthetic pathway.

Entities:  

Year:  2019        PMID: 30811189      PMCID: PMC6944208          DOI: 10.1021/jacs.8b13453

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  21 in total

1.  PqqD is a novel peptide chaperone that forms a ternary complex with the radical S-adenosylmethionine protein PqqE in the pyrroloquinoline quinone biosynthetic pathway.

Authors:  John A Latham; Anthony T Iavarone; Ian Barr; Prerak V Juthani; Judith P Klinman
Journal:  J Biol Chem       Date:  2015-03-27       Impact factor: 5.157

Review 2.  PQQ, the elusive coenzyme.

Authors:  P M Gallop; M A Paz; R Flückiger; H M Kagan
Journal:  Trends Biochem Sci       Date:  1989-08       Impact factor: 13.807

3.  Connectivity between catalytic landscapes of the metallo-β-lactamase superfamily.

Authors:  Florian Baier; Nobuhiko Tokuriki
Journal:  J Mol Biol       Date:  2014-04-24       Impact factor: 5.469

Review 4.  Intrigues and intricacies of the biosynthetic pathways for the enzymatic quinocofactors: PQQ, TTQ, CTQ, TPQ, and LTQ.

Authors:  Judith P Klinman; Florence Bonnot
Journal:  Chem Rev       Date:  2013-12-18       Impact factor: 60.622

5.  Demonstration That the Radical S-Adenosylmethionine (SAM) Enzyme PqqE Catalyzes de Novo Carbon-Carbon Cross-linking within a Peptide Substrate PqqA in the Presence of the Peptide Chaperone PqqD.

Authors:  Ian Barr; John A Latham; Anthony T Iavarone; Teera Chantarojsiri; Jennifer D Hwang; Judith P Klinman
Journal:  J Biol Chem       Date:  2016-03-08       Impact factor: 5.157

Review 6.  Pyrroloquinoline quinone (PQQ) and quinoprotein enzymes.

Authors:  C Anthony
Journal:  Antioxid Redox Signal       Date:  2001-10       Impact factor: 8.401

7.  Distribution and properties of the genes encoding the biosynthesis of the bacterial cofactor, pyrroloquinoline quinone.

Authors:  Yao-Qing Shen; Florence Bonnot; Erin M Imsand; Jordan M RoseFigura; Kimmen Sjölander; Judith P Klinman
Journal:  Biochemistry       Date:  2012-03-09       Impact factor: 3.162

8.  Multistep, eight-electron oxidation catalyzed by the cofactorless oxidase, PqqC: identification of chemical intermediates and their dependence on molecular oxygen.

Authors:  Florence Bonnot; Anthony T Iavarone; Judith P Klinman
Journal:  Biochemistry       Date:  2013-06-25       Impact factor: 3.162

9.  Synthesis and antitumor activity of cysteinyl-3,4-dihydroxyphenylalanines and related compounds.

Authors:  S Ito; S Inoue; Y Yamamoto; K Fujita
Journal:  J Med Chem       Date:  1981-06       Impact factor: 7.446

Review 10.  The Chemical Biology of Human Metallo-β-Lactamase Fold Proteins.

Authors:  Ilaria Pettinati; Jürgen Brem; Sook Y Lee; Peter J McHugh; Christopher J Schofield
Journal:  Trends Biochem Sci       Date:  2016-01-21       Impact factor: 13.807

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  9 in total

1.  A two-component protease in Methylorubrum extorquens with high activity toward the peptide precursor of the redox cofactor pyrroloquinoline quinone.

Authors:  Ana M Martins; John A Latham; Paulo J Martel; Ian Barr; Anthony T Iavarone; Judith P Klinman
Journal:  J Biol Chem       Date:  2019-08-19       Impact factor: 5.157

2.  Structural Properties and Catalytic Implications of the SPASM Domain Iron-Sulfur Clusters in Methylorubrum extorquens PqqE.

Authors:  Wen Zhu; Lindsey M Walker; Lizhi Tao; Anthony T Iavarone; Xuetong Wei; R David Britt; Sean J Elliott; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2020-07-09       Impact factor: 15.419

3.  Biochemical and Structural Characterization of XoxG and XoxJ and Their Roles in Lanthanide-Dependent Methanol Dehydrogenase Activity.

Authors:  Emily R Featherston; Hannah R Rose; Molly J McBride; Ellison M Taylor; Amie K Boal; Joseph A Cotruvo
Journal:  Chembiochem       Date:  2019-08-07       Impact factor: 3.164

Review 4.  Biogenesis of the peptide-derived redox cofactor pyrroloquinoline quinone.

Authors:  Wen Zhu; Judith P Klinman
Journal:  Curr Opin Chem Biol       Date:  2020-07-27       Impact factor: 8.822

5.  MftD Catalyzes the Formation of a Biologically Active Redox Center in the Biosynthesis of the Ribosomally Synthesized and Post-translationally Modified Redox Cofactor Mycofactocin.

Authors:  Richard S Ayikpoe; John A Latham
Journal:  J Am Chem Soc       Date:  2019-08-15       Impact factor: 15.419

Review 6.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

7.  Phenylalanine meta-Hydroxylase: A Single Residue Mediates Mechanistic Control of Aromatic Amino Acid Hydroxylation.

Authors:  Sabine Grüschow; Joanna C Sadler; Peter J Sharratt; Rebecca J M Goss
Journal:  Chembiochem       Date:  2019-07-18       Impact factor: 3.164

Review 8.  RaS-RiPPs in Streptococci and the Human Microbiome.

Authors:  Kenzie A Clark; Leah B Bushin; Mohammad R Seyedsayamdost
Journal:  ACS Bio Med Chem Au       Date:  2022-03-21

9.  Fine-tuning ethanol oxidation pathway enzymes and cofactor PQQ coordinates the conflict between fitness and acetic acid production by Acetobacter pasteurianus.

Authors:  Ling Gao; Xiaodan Wu; Xiaole Xia; Zhengyu Jin
Journal:  Microb Biotechnol       Date:  2020-11-11       Impact factor: 5.813

  9 in total

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