Literature DB >> 30795971

Pioneer Factors and Architectural Proteins Mediating Embryonic Expression Signatures in Cancer.

Stephanie Dobersch1, Karla Rubio1, Guillermo Barreto2.   

Abstract

Accumulation of mutations causing aberrant changes in the genome promotes cancer. However, mutations do not occur in every cancer subtype, suggesting additional events that trigger cancer. Chromatin rearrangements initiated by pioneer factors and architectural proteins are key events occurring before cancer-related genes are expressed. Both protein groups are also master regulators of important processes during embryogenesis. Several publications demonstrated that embryonic gene expression signatures are reactivated during cancer. This review article highlights current knowledge on pioneer factors and architectural proteins mediating chromatin rearrangements, which are the backbone of embryonic expression signatures promoting malignant transformation. Understanding chromatin rearrangements inducing embryonic expression signatures in adult cells might be the key to novel therapeutic approaches against cancers subtypes that arise without genomic mutations.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  architectural proteins; cancer; embryonic; expression signature; pioneer factors

Mesh:

Substances:

Year:  2019        PMID: 30795971     DOI: 10.1016/j.molmed.2019.01.008

Source DB:  PubMed          Journal:  Trends Mol Med        ISSN: 1471-4914            Impact factor:   11.951


  13 in total

1.  Nucleosome allostery in pioneer transcription factor binding.

Authors:  Cheng Tan; Shoji Takada
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-10       Impact factor: 11.205

Review 2.  Lymphoid-specific helicase in epigenetics, DNA repair and cancer.

Authors:  Xiangyu Chen; Yamei Li; Karla Rubio; Bi Deng; Yuyi Li; Qinwei Tang; Chao Mao; Shuang Liu; Desheng Xiao; Guillermo Barreto; Yongguang Tao
Journal:  Br J Cancer       Date:  2021-09-07       Impact factor: 9.075

Review 3.  Pioneering the developmental frontier.

Authors:  Elizabeth D Larson; Audrey J Marsh; Melissa M Harrison
Journal:  Mol Cell       Date:  2021-03-08       Impact factor: 17.970

Review 4.  FoxA factors: the chromatin key and doorstop essential for liver development and function.

Authors:  James A Heslop; Stephen A Duncan
Journal:  Genes Dev       Date:  2020-08-01       Impact factor: 11.361

5.  Inactivation of nuclear histone deacetylases by EP300 disrupts the MiCEE complex in idiopathic pulmonary fibrosis.

Authors:  Karla Rubio; Indrabahadur Singh; Stephanie Dobersch; Pouya Sarvari; Stefan Günther; Julio Cordero; Aditi Mehta; Lukasz Wujak; Hector Cabrera-Fuentes; Cho-Ming Chao; Peter Braubach; Saverio Bellusci; Werner Seeger; Andreas Günther; Klaus T Preissner; Malgorzata Wygrecka; Rajkumar Savai; Dulce Papy-Garcia; Gergana Dobreva; Mathias Heikenwalder; Soni Savai-Pullamsetti; Thomas Braun; Guillermo Barreto
Journal:  Nat Commun       Date:  2019-05-20       Impact factor: 14.919

6.  A 'Goldmine' for digging cancer-specific targets: the genes essential for embryo development but non-essential for adult life.

Authors:  Xiaobin Yu; Jianming Xu
Journal:  J Mol Cell Biol       Date:  2020-09-01       Impact factor: 6.216

7.  Targeting SWI/SNF ATPases in enhancer-addicted prostate cancer.

Authors:  Lanbo Xiao; Abhijit Parolia; Yuanyuan Qiao; Pushpinder Bawa; Sanjana Eyunni; Rahul Mannan; Sandra E Carson; Yu Chang; Xiaoju Wang; Yuping Zhang; Josh N Vo; Steven Kregel; Stephanie A Simko; Andrew D Delekta; Mustapha Jaber; Heng Zheng; Ingrid J Apel; Lisa McMurry; Fengyun Su; Rui Wang; Sylvia Zelenka-Wang; Sanjita Sasmal; Leena Khare; Subhendu Mukherjee; Chandrasekhar Abbineni; Kiran Aithal; Mital S Bhakta; Jay Ghurye; Xuhong Cao; Nora M Navone; Alexey I Nesvizhskii; Rohit Mehra; Ulka Vaishampayan; Marco Blanchette; Yuzhuo Wang; Susanta Samajdar; Murali Ramachandra; Arul M Chinnaiyan
Journal:  Nature       Date:  2021-12-22       Impact factor: 69.504

8.  Pioneer transcription factors are associated with the modulation of DNA methylation patterns across cancers.

Authors:  Roza Berhanu Lemma; Thomas Fleischer; Emily Martinsen; Marit Ledsaak; Vessela Kristensen; Ragnhild Eskeland; Odd Stokke Gabrielsen; Anthony Mathelier
Journal:  Epigenetics Chromatin       Date:  2022-04-19       Impact factor: 5.465

9.  Dynamic changes in cis-regulatory occupancy by Six1 and its cooperative interactions with distinct cofactors drive lineage-specific gene expression programs during progressive differentiation of the auditory sensory epithelium.

Authors:  Jun Li; Ting Zhang; Aarthi Ramakrishnan; Bernd Fritzsch; Jinshu Xu; Elaine Y M Wong; Yong-Hwee Eddie Loh; Jianqiang Ding; Li Shen; Pin-Xian Xu
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

10.  Genomic landscape of a mouse model of diffuse-type gastric adenocarcinoma.

Authors:  Menghua Zhang; Itsuki Sugita; Daisuke Komura; Hiroto Katoh; Shu Shimada; Johji Inazawa; Shinji Tanaka; Shumpei Ishikawa
Journal:  Gastric Cancer       Date:  2021-08-13       Impact factor: 7.370

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