Literature DB >> 30788694

A coarse-graining framework for spiking neuronal networks: from strongly-coupled conductance-based integrate-and-fire neurons to augmented systems of ODEs.

Jiwei Zhang1,2, Yuxiu Shao3,4, Aaditya V Rangan5, Louis Tao6,7.   

Abstract

Homogeneously structured, fluctuation-driven networks of spiking neurons can exhibit a wide variety of dynamical behaviors, ranging from homogeneity to synchrony. We extend our partitioned-ensemble average (PEA) formalism proposed in Zhang et al. (Journal of Computational Neuroscience, 37(1), 81-104, 2014a) to systematically coarse grain the heterogeneous dynamics of strongly coupled, conductance-based integrate-and-fire neuronal networks. The population dynamics models derived here successfully capture the so-called multiple-firing events (MFEs), which emerge naturally in fluctuation-driven networks of strongly coupled neurons. Although these MFEs likely play a crucial role in the generation of the neuronal avalanches observed in vitro and in vivo, the mechanisms underlying these MFEs cannot easily be understood using standard population dynamic models. Using our PEA formalism, we systematically generate a sequence of model reductions, going from Master equations, to Fokker-Planck equations, and finally, to an augmented system of ordinary differential equations. Furthermore, we show that these reductions can faithfully describe the heterogeneous dynamic regimes underlying the generation of MFEs in strongly coupled conductance-based integrate-and-fire neuronal networks.

Entities:  

Keywords:  Coarse-graining method; Homogeneity; Maximum entropy principle; Multiple firing events; Partitioned-ensemble-average; Spiking neurons; Synchrony

Mesh:

Year:  2019        PMID: 30788694     DOI: 10.1007/s10827-019-00712-w

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  67 in total

1.  A population density approach that facilitates large-scale modeling of neural networks: analysis and an application to orientation tuning.

Authors:  D Q Nykamp; D Tranchina
Journal:  J Comput Neurosci       Date:  2000 Jan-Feb       Impact factor: 1.621

2.  Earthquake cycles and neural reverberations: Collective oscillations in systems with pulse-coupled threshold elements.

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Journal:  Phys Rev Lett       Date:  1995-08-07       Impact factor: 9.161

3.  States of high conductance in a large-scale model of the visual cortex.

Authors:  Michael Shelley; David McLaughlin; Robert Shapley; Jacob Wielaard
Journal:  J Comput Neurosci       Date:  2002 Sep-Oct       Impact factor: 1.621

4.  A master equation formalism for macroscopic modeling of asynchronous irregular activity states.

Authors:  Sami El Boustani; Alain Destexhe
Journal:  Neural Comput       Date:  2009-01       Impact factor: 2.026

5.  Distribution of correlated spiking events in a population-based approach for Integrate-and-Fire networks.

Authors:  Jiwei Zhang; Katherine Newhall; Douglas Zhou; Aaditya Rangan
Journal:  J Comput Neurosci       Date:  2013-07-13       Impact factor: 1.621

6.  Diagrammatic expansion of pulse-coupled network dynamics.

Authors:  Aaditya V Rangan
Journal:  Phys Rev Lett       Date:  2009-04-13       Impact factor: 9.161

7.  Cusps enable line attractors for neural computation.

Authors:  Zhuocheng Xiao; Jiwei Zhang; Andrew T Sornborger; Louis Tao
Journal:  Phys Rev E       Date:  2017-11-07       Impact factor: 2.529

Review 8.  The functional architecture of the ventral temporal cortex and its role in categorization.

Authors:  Kalanit Grill-Spector; Kevin S Weiner
Journal:  Nat Rev Neurosci       Date:  2014-06-25       Impact factor: 34.870

Review 9.  Network oscillations: emerging computational principles.

Authors:  Terrence J Sejnowski; Ole Paulsen
Journal:  J Neurosci       Date:  2006-02-08       Impact factor: 6.167

10.  Stimulus onset quenches neural variability: a widespread cortical phenomenon.

Authors:  Mark M Churchland; Byron M Yu; John P Cunningham; Leo P Sugrue; Marlene R Cohen; Greg S Corrado; William T Newsome; Andrew M Clark; Paymon Hosseini; Benjamin B Scott; David C Bradley; Matthew A Smith; Adam Kohn; J Anthony Movshon; Katherine M Armstrong; Tirin Moore; Steve W Chang; Lawrence H Snyder; Stephen G Lisberger; Nicholas J Priebe; Ian M Finn; David Ferster; Stephen I Ryu; Gopal Santhanam; Maneesh Sahani; Krishna V Shenoy
Journal:  Nat Neurosci       Date:  2010-02-21       Impact factor: 24.884

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  1 in total

1.  A data-informed mean-field approach to mapping of cortical parameter landscapes.

Authors:  Zhuo-Cheng Xiao; Kevin K Lin; Lai-Sang Young
Journal:  PLoS Comput Biol       Date:  2021-12-23       Impact factor: 4.475

  1 in total

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