Literature DB >> 30753077

Two-State, Three-Mode Parametrization of the Force Field of a Retinal Chromophore Model.

Emanuele Marsili1, Marwa H Farag2, Xuchun Yang3, Luca De Vico1, Massimo Olivucci1,3,4.   

Abstract

In recent years, the potential energy surfaces of the penta-2,4-dieniminium cation have been investigated using several electronic structure methods. The resulting pool of geometrical, electronic, and energy data provides a suitable basis for the construction of a topographically correct analytical model of the molecule force field and, therefore, for a better understanding of this class of molecules, which includes the chromophore of visual pigments. In the present contribution, we report the construction of such a model for regions of the force field that drive the photochemical and thermal isomerization of the central double bound of the cation. While previous models included only two modes, it is here shown that the proposed three-mode model and corresponding set of parameters are able to reproduce the complex topographical and electronic structure features seen in electronically correlated data obtained at the XMCQDPT2//CASSCF/6-31G* level of theory.

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Year:  2019        PMID: 30753077      PMCID: PMC7147463          DOI: 10.1021/acs.jpca.8b10010

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  25 in total

1.  Mapping the Excited State Potential Energy Surface of a Retinal Chromophore Model with Multireference and Equation-of-Motion Coupled-Cluster Methods.

Authors:  Samer Gozem; Federico Melaccio; Roland Lindh; Anna I Krylov; Alexander A Granovsky; Celestino Angeli; Massimo Olivucci
Journal:  J Chem Theory Comput       Date:  2013-09-06       Impact factor: 6.006

2.  Shape of Multireference, Equation-of-Motion Coupled-Cluster, and Density Functional Theory Potential Energy Surfaces at a Conical Intersection.

Authors:  Samer Gozem; Federico Melaccio; Alessio Valentini; Michael Filatov; Miquel Huix-Rotllant; Nicolas Ferré; Luis Manuel Frutos; Celestino Angeli; Anna I Krylov; Alexander A Granovsky; Roland Lindh; Massimo Olivucci
Journal:  J Chem Theory Comput       Date:  2014-06-11       Impact factor: 6.006

3.  Extended multi-configuration quasi-degenerate perturbation theory: the new approach to multi-state multi-reference perturbation theory.

Authors:  Alexander A Granovsky
Journal:  J Chem Phys       Date:  2011-06-07       Impact factor: 3.488

4.  The Primary Photochemistry of Vision Occurs at the Molecular Speed Limit.

Authors:  Philip J M Johnson; Marwa H Farag; Alexei Halpin; Takefumi Morizumi; Valentyn I Prokhorenko; Jasper Knoester; Thomas L C Jansen; Oliver P Ernst; R J Dwayne Miller
Journal:  J Phys Chem B       Date:  2017-04-13       Impact factor: 2.991

5.  On the Dynamics through a Conical Intersection.

Authors:  Basile F E Curchod; Federica Agostini
Journal:  J Phys Chem Lett       Date:  2017-02-06       Impact factor: 6.475

6.  Photoisomerization mechanism of 11-cis-locked artificial retinal chromophores: acceleration and primary photoproduct assignment.

Authors:  Luca De Vico; Marco Garavelli; Fernando Bernardi; Massimo Olivucci
Journal:  J Am Chem Soc       Date:  2005-03-02       Impact factor: 15.419

7.  Excitation of biomolecules with incoherent light: quantum yield for the photoisomerization of model retinal.

Authors:  T V Tscherbul; P Brumer
Journal:  J Phys Chem A       Date:  2014-04-17       Impact factor: 2.781

8.  Probing the Interstate Coupling near a Conical Intersection by Optical Spectroscopy.

Authors:  Marwa H Farag; Thomas L C Jansen; Jasper Knoester
Journal:  J Phys Chem Lett       Date:  2016-08-12       Impact factor: 6.475

9.  Nuclear Energy Gradients for Internally Contracted Complete Active Space Second-Order Perturbation Theory: Multistate Extensions.

Authors:  Bess Vlaisavljevich; Toru Shiozaki
Journal:  J Chem Theory Comput       Date:  2016-07-20       Impact factor: 6.006

10.  The origin of absorptive features in the two-dimensional electronic spectra of rhodopsin.

Authors:  Marwa H Farag; Thomas L C Jansen; Jasper Knoester
Journal:  Phys Chem Chem Phys       Date:  2018-05-09       Impact factor: 3.676

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  1 in total

1.  Control of Protonated Schiff Base Excited State Decay within Visual Protein Mimics: A Unified Model for Retinal Chromophores.

Authors:  Baptiste Demoulin; Margherita Maiuri; Tetyana Berbasova; James H Geiger; Babak Borhan; Marco Garavelli; Giulio Cerullo; Ivan Rivalta
Journal:  Chemistry       Date:  2021-10-28       Impact factor: 5.236

  1 in total

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