Literature DB >> 30735871

Prediction of IDH1 Mutation Status in Glioblastoma Using Machine Learning Technique Based on Quantitative Radiomic Data.

Min Ho Lee1, Junhyung Kim2, Sung-Tae Kim3, Hye-Mi Shin4, Hye-Jin You4, Jung Won Choi1, Ho Jun Seol1, Do-Hyun Nam5, Jung-Il Lee1, Doo-Sik Kong6.   

Abstract

OBJECTIVE: Isocitrate dehydrogenase 1 (IDH1) mutation status is an independent favorable prognostic factor for glioblastoma (GBM) and is usually determined by sequencing or immunohistochemistry. An accurate prediction of IDH1 mutation status via noninvasive methods helps establish the appropriate treatment strategy. We aimed to predict IDH1 mutation status using quantitative radiomic data in patients with GBM.
METHODS: Between May 2010 and June 2015, we retrospectively identified 88 patients with newly diagnosed GBM. After semiautomatic segmentation of the lesions, we extracted 31 features from preoperative multiparametric magnetic resonance images. We also determined IDH1 mutation status using targeted sequencing and immunohistochemistry. A training cohort (n = 88) was used to train machine learning-based classifiers, with internal validation. The machine-learning technique was then validated in an external dataset of 35 patients with GBM.
RESULTS: We detected the IDH1 mutation in 12 out of 88 GBMs. Multiparametric radiomic profiles revealed that the IDH1 mutation was associated with a smaller enhancing area volume and a larger necrotic area volume. Using the machine learning-based classification algorithms, we identified 70.3%-87.3% of prediction rate of IDH1 mutation status and found 66.3%-83.4% accuracy in the external validation set.
CONCLUSIONS: We demonstrate that machine learning algorithms can predict IDH1 mutation status in GBM using preoperative multiparametric magnetic resonance images.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Glioblastoma; Isocitrate dehydrogenase; Machine learning; Magnetic resonance imaging; Mutation

Mesh:

Substances:

Year:  2019        PMID: 30735871     DOI: 10.1016/j.wneu.2019.01.157

Source DB:  PubMed          Journal:  World Neurosurg        ISSN: 1878-8750            Impact factor:   2.104


  11 in total

Review 1.  Precision Digital Oncology: Emerging Role of Radiomics-based Biomarkers and Artificial Intelligence for Advanced Imaging and Characterization of Brain Tumors.

Authors:  Reza Forghani
Journal:  Radiol Imaging Cancer       Date:  2020-07-31

Review 2.  Radiomics for precision medicine in glioblastoma.

Authors:  Kiran Aftab; Faiqa Binte Aamir; Saad Mallick; Fatima Mubarak; Whitney B Pope; Tom Mikkelsen; Jack P Rock; Syed Ather Enam
Journal:  J Neurooncol       Date:  2022-01-12       Impact factor: 4.130

3.  Development and Validation of a Deep Learning-Based Model to Distinguish Glioblastoma from Solitary Brain Metastasis Using Conventional MR Images.

Authors:  I Shin; H Kim; S S Ahn; B Sohn; S Bae; J E Park; H S Kim; S-K Lee
Journal:  AJNR Am J Neuroradiol       Date:  2021-03-18       Impact factor: 4.966

4.  Correction to: Advanced imaging in adult diffusely infiltrating low-grade gliomas.

Authors:  Nail Bulakbaşı; Yahya Paksoy
Journal:  Insights Imaging       Date:  2020-04-22

5.  A systematic review reporting quality of radiomics research in neuro-oncology: toward clinical utility and quality improvement using high-dimensional imaging features.

Authors:  Ji Eun Park; Ho Sung Kim; Donghyun Kim; Seo Young Park; Jung Youn Kim; Se Jin Cho; Jeong Hoon Kim
Journal:  BMC Cancer       Date:  2020-01-10       Impact factor: 4.430

Review 6.  Advanced imaging in adult diffusely infiltrating low-grade gliomas.

Authors:  Nail Bulakbaşı; Yahya Paksoy
Journal:  Insights Imaging       Date:  2019-12-18

7.  Radiomics-based prediction of multiple gene alteration incorporating mutual genetic information in glioblastoma and grade 4 astrocytoma, IDH-mutant.

Authors:  Beomseok Sohn; Chansik An; Dain Kim; Sung Soo Ahn; Kyunghwa Han; Se Hoon Kim; Seok-Gu Kang; Jong Hee Chang; Seung-Koo Lee
Journal:  J Neurooncol       Date:  2021-10-14       Impact factor: 4.130

8.  Multiparametric MRI texture analysis in prediction of glioma biomarker status: added value of MR diffusion.

Authors:  Shingo Kihira; Nadejda M Tsankova; Adam Bauer; Yu Sakai; Keon Mahmoudi; Nicole Zubizarreta; Jane Houldsworth; Fahad Khan; Noriko Salamon; Adilia Hormigo; Kambiz Nael
Journal:  Neurooncol Adv       Date:  2021-04-08

Review 9.  Accuracy of Machine Learning Algorithms for the Classification of Molecular Features of Gliomas on MRI: A Systematic Literature Review and Meta-Analysis.

Authors:  Evi J van Kempen; Max Post; Manoj Mannil; Benno Kusters; Mark Ter Laan; Frederick J A Meijer; Dylan J H A Henssen
Journal:  Cancers (Basel)       Date:  2021-05-26       Impact factor: 6.639

10.  MRI Radiomic Features to Predict IDH1 Mutation Status in Gliomas: A Machine Learning Approach using Gradient Tree Boosting.

Authors:  Yu Sakai; Chen Yang; Shingo Kihira; Nadejda Tsankova; Fahad Khan; Adilia Hormigo; Albert Lai; Timothy Cloughesy; Kambiz Nael
Journal:  Int J Mol Sci       Date:  2020-10-27       Impact factor: 5.923

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