| Literature DB >> 30735557 |
Yeon Jin Cho1,2, Woo Sun Kim1,2,3, Young Hun Choi1,2, Ji Young Ha4, SeungHyun Lee1,2, Sang Joon Park1,5, Jung-Eun Cheon1,2,3, Hyoung Jin Kang5,6,7, Hee Young Shin5,6,7, In-One Kim1,2,3.
Abstract
OBJECTIVE: To retrospectively evaluate the value of computerized 3D texture analysis for differentiating pulmonary metastases from non-metastatic lesions in pediatric patients with osteosarcoma.Entities:
Mesh:
Year: 2019 PMID: 30735557 PMCID: PMC6368316 DOI: 10.1371/journal.pone.0211969
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Flow diagram illustrating the inclusion/exclusion process of this study.
Fig 2Texture analysis process.
The screen-capture image shows the brief process of texture analysis using the in-house software program. The segmentation of pulmonary nodules is manually performed, and texture features of the nodules are automatically extracted by the software program.
Intraclass correlation coefficients for inter-observer reproducibility of texture features.
| Characteristic | Observer 1 | Observer 2 | ICC |
|---|---|---|---|
| Mean attenuation (HU) | -72.1 ± 213.2 | -76.9 ± 217.3 | 0.996 |
| Standard deviation (HU) | 225.4 ± 125.8 | 222.2 ± 127.5 | 0.993 |
| Variance (HU) | 66248.8 ± 92125.6 | 65252.8 ± 95591.1 | 0.997 |
| Skewness | 0.404 ± 0.546 | 0.081 ± 0.520 | 0.929 |
| Kurtosis | -0.351 ± 0.886 | -0.389 ± 0.879 | 0.975 |
| Effective diameter (mm) | 6.7 ± 9.3 | 6.6 ± 9.2 | 0.999 |
| Surface area (mm2) | 251.6 ± 496.7 | 248.2 ± 506.2 | 0.998 |
| Volume (mm3) | 409.7 ± 1186.6 | 398.7 ± 1172.0 | 1.000 |
| Sphericity | 0.800 ± 0.138 | 0.791 ± 0.128 | 0.950 |
| Discrete compactness | -0.364 ± 0.832 | -0.488 ± 0.879 | 0.821 |
| GLCM moments | 1.9 ± 0.3 | 1.9 ± 0.3 | 0.946 |
| GLCM ASM | 0.004 ± 0.005 | 0.004 ± 0.005 | 0.992 |
| GLCM IDM | 0.005 ± 0.003 | 0.005 ± 0.004 | 0.989 |
| GLCM contrast | 109554.5 ± 92995.4 | 106283.8 ± 94857.2 | 0.994 |
| GLCM entropy | 2.9 ± 0.8 | 2.9 ± 0.8 | 0.999 |
ICC = intraclass correlation coefficient; CIs = confidence intervals; HU = hounsfield unit
Note. Except where indicated, data are mean ± standard deviation.
Histographic, Volumetric, and morphologic features of pulmonary metastases and non-metastatic lesions in all the pediatric patients with osteosarcoma.
| Characteristic | Pulmonary metastases (n = 24) | Non-metastatic lesion (n = 18) | P-value |
|---|---|---|---|
| Mean attenuation (HU) | 51.4 ± 198.6 | -242.4 ± 75.7 | <0.001 |
| Standard deviation (HU) | 272.0 ± 146.9 | 159.6 ± 39.6 | 0.001 |
| Variance (HU) | 94666.4 ± 116166.8 | 27196.7 ± 13103.8 | 0.009 |
| Skewness | -0.069 ± 0.488 | 0.2334 ± 0.512 | 0.059 |
| Kurtosis | -0.214 ± 0.924 | -0.578 ± 0.773 | 0.184 |
| Effective diameter (mm) | 10.1 ± 11.1 | 2.0 ± 0.9 | 0.002 |
| Surface area (mm2) | 410.0 ± 620.1 | 36.4 ± 26.2 | 0.007 |
| Volume (mm3) | 695.6 ± 1507.2 | 15.8 ± 14.6 | 0.037 |
| Sphericity | 0.777 ± 0.151 | 0.821 ± 0.091 | 0.247 |
| Discrete compactness | -0.003 ± 0.558 | -0.990 ± 0.699 | <0.001 |
| GLCM moments | 1.9 ± 0.2 | 1.8 ± 0.3 | 0.058 |
| GLCM ASM | 0.001 ± 0.003 | 0.007 ± 0.006 | 0.004 |
| GLCM IDM | 0.006 ± 0.003 | 0.003 ± 0.003 | 0.015 |
| GLCM contrast | 124301.1 ± 121736.8 | 86076.5 ± 14546.1 | 0.141 |
| GLCM entropy | 3.4 ± 0.8 | 2.3 ± 0.4 | <0.001 |
Note. Except where indicated, data are mean ± standard deviation. GLCM = gray-level co-occurrence matrix, ASM = angular second moment, IDM = inverse difference moment.
* Independent-sample t-test.
Histographic, Volumetric, and morphologic features of pulmonary metastases and non-metastatic lesions in small non-calcified pulmonary nodules.
| Variable | Pulmonary metastases (n = 7) | Non-metastatic lesions (n = 18) | P-value |
|---|---|---|---|
| Mean attenuation (HU) | -116.5 ± 91.8 | -242.4 ± 75.7 | 0.002 |
| Standard deviation (HU) | 195.6 ± 40.0 | 159.6 ± 39.6 | 0.054 |
| Variance (HU) | 39658.2 ± 15900.2 | 27196.7 ± 13103.8 | 0.056 |
| Skewness | -0.191 ± 0.252 | 0.233 ± 0.512 | 0.049 |
| Kurtosis | -1.031 ± 0.213 | -0.578 ± 0.773 | 0.144 |
| Effective diameter (mm) | 3.4 ± 1.7 | 2.0 ± 0.9 | 0.080 |
| Surface area (mm2) | 75.5 ± 49.5 | 36.4 ± 26.2 | 0.086 |
| Volume (mm3) | 45.0 ± 35.9 | 15.8 ± 14.6 | 0.077 |
| Sphericity | 0.863 ± 0.091 | 0.821 ± 0.091 | 0.313 |
| Discrete compactness | -0.403 ± 0.716 | -0.990 ± 0.699 | 0.074 |
| GLCM moments | 1.9 ± 0.3 | 1.8 ± 0.3 | 0.249 |
| GLCM ASM | 0.004 ± 0.005 | 0.007 ± 0.006 | 0.361 |
| GLCM IDM | 0.005± 0.005 | 0.003 ± 0.003 | 0.227 |
| GLCM contrast | 96101.5 ± 44711.6 | 86076.5 ± 14546.1 | 0.581 |
| GLCM entropy | 2.6 ± 0.5 | 2.3 ± 0.4 | 0.104 |
Note. Except where indicated, data are mean ± standard deviation. GLCM = gray-level co-occurrence matrix, ASM = angular second moment, IDM = inverse difference moment.
* Independent-sample t-test.
Fig 3Correlation matrix of texture features.
The correlation matrix was created with 10 of 15 texture features those showed statistically significant differences in independent t-test. The standard deviation and variance showed significant correlation with mean attenuation. The surface area, volume and GLCM entropy showed significant correlation with effective diameter. Pearson correlation coefficient of each pair of texture features was shown in the upper right corner of the scatter plot. *P < 0.05; **P < 0.01.
Results of logistic regression analysis for predictors of pulmonary metastases and non-metastatic lesions in pulmonary nodules.
| Variable | Adjusted Odds Ratio | P-value* | |
|---|---|---|---|
| Total Group | Mean attenuation (HU) | 1.014 (1.005–1.024) | 0.003 |
| Effective diameter (mm) | 1.745 (1.129–2.698) | 0.012 | |
| Non-calcified Small Nodules | Mean attenuation (HU) | 1.007 (1.002–1.012) | 0.008 |
Note. Data are adjusted odds ratios per one standard deviation change; data in parentheses are 95% confidence intervals.
Fig 4Texture analysis of pulmonary nodules: Metastatic nodules versus non-metastatic nodules.
(A) CT scan shows a 12.8-mm solid pulmonary nodule (arrow) with calcification. This nodule shows high mean attenuation (123.6 ± 289.6 HU). The pulmonary nodule was confirmed as a pulmonary metastasis. (B) CT scan shows a 2.9-mm small non-calcified pulmonary nodule (arrow). This nodule shows relatively high mean attenuation (-8.8 ± 255.8 HU). It was confirmed as a pulmonary metastasis. (C) CT scan shows a 2.4-mm small non-calcified pulmonary nodule (arrow). This nodule has relatively low mean attenuation (-229.9 ± 212.3 HU). It was confirmed as an intrapulmonary lymph node.
Fig 5Receiver operator characteristic (ROC) curve analysis.
Receiver operator characteristic (ROC) curve for mean attenuation and effective diameter obtained by texture analysis and conventional measurement for differentiating pulmonary metastases and non-pulmonary metastatic lesions. ROC was performed for mean attenuation (A) and effective diameter (B) in the total group, and for mean attenuation in the small non-calcified nodule group (C).