Literature DB >> 30734172

Family-1 UDP glycosyltransferases in pear (Pyrus bretschneideri): Molecular identification, phylogenomic characterization and expression profiling during stone cell formation.

Xi Cheng1, Abdullah Muhammad1, Guohui Li1, Jingyun Zhang1,2, Jun Cheng1, Jingxiang Qiu1, Taoshan Jiang1, Qing Jin1, Yongping Cai3, Yi Lin4.   

Abstract

Stone cells are a characteristic trait of pear fruits, and excessive stone cell formation has a significant negative impact on the texture and flavour of the pulp. Lignin is one of the main components of stone cells. Family-1 uridine diphosphate-glycosyltransferases (UGTs) are responsible for the glycosylation modification of monolignols. However, information remains limited regarding the relationship between UGTs and stone cell formation. To address this problem, we identified 139 UGTs from the pear genome, which were distributed in 15 phylogenetic groups (A-M, O, and P). We also performed a collinearity analysis of UGTs among four Rosaceae plants (pear, peach, mei, and strawberry). Phylogenetic analysis suggested that 13 PbUGTs might be related to the glycosylation of monolignols. Analysis of expression patterns demonstrated that most putative monolignol glycosylation-related PbUGTs not only showed high expression levels in flowers and buds but were also induced by exogenous ABA, SA, and MeJA. In addition, the transcript level of Pbr005014.1 (named PbUGT72AJ2) was consistent with the changing trend of lignin content in pear fruit, and the transcript level was also higher in 'Dangshan Su' pear with higher lignin and stone cell contents. Subcellular localization results showed that PbUGT72AJ2 was located mainly in the cytomembrane and cytoplasm. Based on our study, PbUGT72AJ2 is considered to be a monolignol glycosylation-related UGT. Our results provide an important source for the identification of UGTs and a foundation for the future understanding and manipulation of lignin metabolism and stone cell formation in pear fruit.

Entities:  

Keywords:  Lignin; Pear; Phylogenetic and expression analysis; Stone cell; Subcellular localization; UGT family

Mesh:

Substances:

Year:  2019        PMID: 30734172     DOI: 10.1007/s11033-019-04669-y

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  62 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  The activity of Arabidopsis glycosyltransferases toward salicylic acid, 4-hydroxybenzoic acid, and other benzoates.

Authors:  Eng-Kiat Lim; Charlotte J Doucet; Yi Li; Luisa Elias; Dawn Worrall; Steven P Spencer; Joe Ross; Dianna J Bowles
Journal:  J Biol Chem       Date:  2001-10-18       Impact factor: 5.157

3.  Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor.

Authors:  Takayuki Tohge; Yasutaka Nishiyama; Masami Yokota Hirai; Mitsuru Yano; Jun-ichiro Nakajima; Motoko Awazuhara; Eri Inoue; Hideki Takahashi; Dayan B Goodenowe; Masahiko Kitayama; Masaaki Noji; Mami Yamazaki; Kazuki Saito
Journal:  Plant J       Date:  2005-04       Impact factor: 6.417

4.  Phylogenetic analysis of the UDP-glycosyltransferase multigene family of Arabidopsis thaliana.

Authors:  Y Li; S Baldauf; E K Lim; D J Bowles
Journal:  J Biol Chem       Date:  2000-10-20       Impact factor: 5.157

5.  Identification of glucosyltransferase genes involved in sinapate metabolism and lignin synthesis in Arabidopsis.

Authors:  E K Lim; Y Li; A Parr; R Jackson; D A Ashford; D J Bowles
Journal:  J Biol Chem       Date:  2000-10-20       Impact factor: 5.157

6.  N-glucosylation of cytokinins by glycosyltransferases of Arabidopsis thaliana.

Authors:  Bingkai Hou; Eng-Kiat Lim; Gillian S Higgins; Dianna J Bowles
Journal:  J Biol Chem       Date:  2004-09-01       Impact factor: 5.157

7.  Regioselectivity of glucosylation of caffeic acid by a UDP-glucose:glucosyltransferase is maintained in planta.

Authors:  Eng-Kiat Lim; Gillian S Higgins; Yi Li; Dianna J Bowles
Journal:  Biochem J       Date:  2003-08-01       Impact factor: 3.857

8.  The behavior of deuterium-labeled monolignol and monolignol glucosides in lignin biosynthesis in angiosperms.

Authors:  Yukiko Tsuji; Fang Chen; Seiichi Yasuda; Kazuhiko Fukushima
Journal:  J Agric Food Chem       Date:  2004-01-14       Impact factor: 5.279

Review 9.  Higher plant glycosyltransferases.

Authors:  J Ross; Y Li; E Lim; D J Bowles
Journal:  Genome Biol       Date:  2001-02-07       Impact factor: 13.583

Review 10.  A class of plant glycosyltransferases involved in cellular homeostasis.

Authors:  Eng-Kiat Lim; Dianna J Bowles
Journal:  EMBO J       Date:  2004-07-08       Impact factor: 11.598

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  8 in total

1.  Analysis of the β-Glucosidase Family Reveals Genes Involved in the Lignification of Stone Cells in Chinese White Pear (Pyrus bretschneideri Rehd.).

Authors:  Han Wang; Yingjie Zhang; Xiaofeng Feng; Fulei Peng; Muhammad Aamir Mazoor; Yang Zhang; Yu Zhao; WenLong Han; Jinjin Lu; Yunpeng Cao; Yongping Cai
Journal:  Front Plant Sci       Date:  2022-05-10       Impact factor: 6.627

2.  Functional analysis of a novel C-glycosyltransferase in the orchid Dendrobium catenatum.

Authors:  Zhiyao Ren; Xiaoyu Ji; Zhenbin Jiao; Yingyi Luo; Guo-Qiang Zhang; Shengchang Tao; Zhouxi Lei; Jing Zhang; Yuchen Wang; Zhong-Jian Liu; Gang Wei
Journal:  Hortic Res       Date:  2020-07-01       Impact factor: 6.793

3.  Functional analysis of a novel C-glycosyltransferase in the orchid Dendrobium catenatum.

Authors:  Zhiyao Ren; Xiaoyu Ji; Zhenbin Jiao; Yingyi Luo; Guo-Qiang Zhang; Shengchang Tao; Zhouxi Lei; Jing Zhang; Yuchen Wang; Zhong-Jian Liu; Gang Wei
Journal:  Hortic Res       Date:  2020-07-01       Impact factor: 6.793

4.  In Silico Genome-Wide Analysis of Respiratory Burst Oxidase Homolog (RBOH) Family Genes in Five Fruit-Producing Trees, and Potential Functional Analysis on Lignification of Stone Cells in Chinese White Pear.

Authors:  Xi Cheng; Guohui Li; Muhammad Aamir Manzoor; Han Wang; Muhammad Abdullah; Xueqiang Su; Jingyun Zhang; Taoshan Jiang; Qing Jin; Yongping Cai; Yi Lin
Journal:  Cells       Date:  2019-05-29       Impact factor: 6.600

5.  Tandem UGT71B5s Catalyze Lignan Glycosylation in Isatis indigotica With Substrates Promiscuity.

Authors:  Xiao Chen; Junfeng Chen; Jingxian Feng; Yun Wang; Shunuo Li; Ying Xiao; Yong Diao; Lei Zhang; Wansheng Chen
Journal:  Front Plant Sci       Date:  2021-03-31       Impact factor: 5.753

6.  PbUGT72AJ2-Mediated Glycosylation Plays an Important Role in Lignin Formation and Stone Cell Development in Pears (Pyrus bretschneideri).

Authors:  Han Wang; Xiaofeng Feng; Yingjie Zhang; Dongyi Wei; Yang Zhang; Qing Jin; Yongping Cai
Journal:  Int J Mol Sci       Date:  2022-07-18       Impact factor: 6.208

7.  Evolutionary and Integrative Analysis of Gibberellin-Dioxygenase Gene Family and Their Expression Profile in Three Rosaceae Genomes (F. vesca, P. mume, and P. avium) Under Phytohormone Stress.

Authors:  Irfan Ali Sabir; Muhammad Aamir Manzoor; Iftikhar Hussain Shah; Farhat Abbas; Xunju Liu; Sajid Fiaz; Adnan Noor Shah; Songtao Jiu; Jiyuan Wang; Muhammad Abdullah; Caixi Zhang
Journal:  Front Plant Sci       Date:  2022-07-07       Impact factor: 6.627

Review 8.  UGT72, a Major Glycosyltransferase Family for Flavonoid and Monolignol Homeostasis in Plants.

Authors:  Nathanaël Speeckaert; Mondher El Jaziri; Marie Baucher; Marc Behr
Journal:  Biology (Basel)       Date:  2022-03-14
  8 in total

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