Literature DB >> 30729694

RNAs in the spliceosome: Insight from cryoEM structures.

Lingdi Zhang1, Anne Vielle1, Sara Espinosa1, Rui Zhao1.   

Abstract

Pre-mRNA splicing is catalyzed by the spliceosome, a multimegadalton RNA-protein complex. The spliceosome undergoes dramatic compositional and conformational changes through the splicing cycle, forming at least 10 distinct complexes. Recent high-resolution cryoEM structures of various spliceosomal complexes revealed unprecedented details of this large molecular machine. This review highlights insight into the structure and function of the spliceosomal RNA components obtained from these new structures, with a focus on the yeast spliceosome. This article is categorized under: RNA Processing > Splicing Mechanisms RNA Structure and Dynamics > RNA Structure, Dynamics, and Chemistry RNA Interactions with Proteins and Other Molecules > RNA-Protein Complexes.
© 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  RNA; cryoEM; spliceosome

Mesh:

Substances:

Year:  2019        PMID: 30729694      PMCID: PMC6450755          DOI: 10.1002/wrna.1523

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  91 in total

Review 1.  Alternative RNA splicing in the nervous system.

Authors:  P J Grabowski; D L Black
Journal:  Prog Neurobiol       Date:  2001-10       Impact factor: 11.685

Review 2.  Pre-mRNA splicing in the new millennium.

Authors:  M L Hastings; A R Krainer
Journal:  Curr Opin Cell Biol       Date:  2001-06       Impact factor: 8.382

Review 3.  Pre-mRNA splicing: awash in a sea of proteins.

Authors:  Melissa S Jurica; Melissa J Moore
Journal:  Mol Cell       Date:  2003-07       Impact factor: 17.970

4.  The spliceosome as ribozyme hypothesis takes a second step.

Authors:  Samuel E Butcher
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-21       Impact factor: 11.205

5.  Two domains of yeast U6 small nuclear RNA required for both steps of nuclear precursor messenger RNA splicing.

Authors:  P Fabrizio; J Abelson
Journal:  Science       Date:  1990-10-19       Impact factor: 47.728

6.  An Atomic Structure of the Human Spliceosome.

Authors:  Xiaofeng Zhang; Chuangye Yan; Jing Hang; Lorenzo I Finci; Jianlin Lei; Yigong Shi
Journal:  Cell       Date:  2017-05-11       Impact factor: 41.582

7.  Prp43 is an essential RNA-dependent ATPase required for release of lariat-intron from the spliceosome.

Authors:  Arnold Martin; Susanne Schneider; Beate Schwer
Journal:  J Biol Chem       Date:  2002-03-08       Impact factor: 5.157

8.  An early hierarchic role of U1 small nuclear ribonucleoprotein in spliceosome assembly.

Authors:  S W Ruby; J Abelson
Journal:  Science       Date:  1988-11-18       Impact factor: 47.728

9.  Early commitment of yeast pre-mRNA to the spliceosome pathway.

Authors:  P Legrain; B Seraphin; M Rosbash
Journal:  Mol Cell Biol       Date:  1988-09       Impact factor: 4.272

10.  Lariat RNA's as intermediates and products in the splicing of messenger RNA precursors.

Authors:  R A Padgett; M M Konarska; P J Grabowski; S F Hardy; P A Sharp
Journal:  Science       Date:  1984-08-31       Impact factor: 47.728

View more
  8 in total

Review 1.  Structures of SF3b1 reveal a dynamic Achilles heel of spliceosome assembly: Implications for cancer-associated abnormalities and drug discovery.

Authors:  Debanjana Maji; Alan Grossfield; Clara L Kielkopf
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-11-09       Impact factor: 4.490

2.  Transcript-specific determinants of pre-mRNA splicing revealed through in vivo kinetic analyses of the 1st and 2nd chemical steps.

Authors:  Michael A Gildea; Zachary W Dwyer; Jeffrey A Pleiss
Journal:  Mol Cell       Date:  2022-07-12       Impact factor: 19.328

3.  Quantitative prediction of variant effects on alternative splicing in MAPT using endogenous pre-messenger RNA structure probing.

Authors:  Jayashree Kumar; Lela Lackey; Justin M Waldern; Abhishek Dey; Anthony M Mustoe; Kevin M Weeks; David H Mathews; Alain Laederach
Journal:  Elife       Date:  2022-06-13       Impact factor: 8.713

4.  An Unusual U2AF2 Inhibits Splicing and Attenuates the Virulence of the Human Protozoan Parasite Entamoeba histolytica.

Authors:  Gretter González-Blanco; Guillermina García-Rivera; Patricia Talmás-Rohana; Ester Orozco; José Manuel Galindo-Rosales; Cristina Vélez; Odila Salucedo-Cárdenas; Elisa Azuara-Liceaga; Mario Alberto Rodríguez-Rodríguez; Tomoyoshi Nozaki; Jesús Valdés
Journal:  Front Cell Infect Microbiol       Date:  2022-06-17       Impact factor: 6.073

5.  RNAspider: a webserver to analyze entanglements in RNA 3D structures.

Authors:  Kamil Luwanski; Vladyslav Hlushchenko; Mariusz Popenda; Tomasz Zok; Joanna Sarzynska; Daniil Martsich; Marta Szachniuk; Maciej Antczak
Journal:  Nucleic Acids Res       Date:  2022-03-29       Impact factor: 19.160

6.  Role of the central junction in folding topology of the protein-free human U2-U6 snRNA complex.

Authors:  Huong Chu; William Perea; Nancy L Greenbaum
Journal:  RNA       Date:  2020-03-27       Impact factor: 4.942

Review 7.  Unraveling the structure and biological functions of RNA triple helices.

Authors:  Jessica A Brown
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-05-22       Impact factor: 9.957

8.  Unique and Repeated Stwintrons (Spliceosomal Twin Introns) in the Hypoxylaceae.

Authors:  Erzsébet Fekete; Fruzsina Pénzes; Norbert Ág; Viktória Ág-Rácz; Erzsébet Sándor; Claudio Scazzocchio; Michel Flipphi; Levente Karaffa
Journal:  J Fungi (Basel)       Date:  2022-04-13
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.