| Literature DB >> 30726262 |
Thiago Accioly1, Julieth O Sousa1, Pierre-Arthur Moreau2, Christophe Lécuru3, Bianca D B Silva4, Mélanie Roy5, Monique Gardes5, Iuri G Baseia6, María P Martín7.
Abstract
Taxonomy of Geastrum species in the neotropics has been subject to divergent opinions among specialists. In our study, type collections were reassessed and compared with recent collections in order to delimit species in Geastrum, sect. Myceliostroma, subsect. Epigaea. A thorough review of morphologic features combined with barcode and phylogenetic analyses (ITS and LSU nrDNA) revealed six new species (G. neoamericanum, G. rubellum, G. brunneocapillatum, G. baculicrystallum, G. rubropusillum and G. courtecuissei). In additon, the presence of hairs on the exoperidium, a commonly used feature to diagnose Geastrum species, proved to be ineffective because it is a derived character within subsect. Epigaea.Entities:
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Year: 2019 PMID: 30726262 PMCID: PMC6364924 DOI: 10.1371/journal.pone.0211388
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Specimens and sequences included in this study.
Clades as indicated from the bottom-up in Fig 1. Accession numbers in bold are from newly generated sequences.
| Clade—Species | Fungarium Number | Country | Genbank Acc. N° ITS | Genbank Acc. N° LSU |
|---|---|---|---|---|
| Clade I— | K(M)180188 Type | Suriname | - | - |
| K(M) 180187 Isotype | Suriname | |||
| INPA 143435 | Brazil | - | ||
| Clade II— | TNS 36758 | Japan, Bonin Island | JN845108 | JN845226 |
| TNS 36761 | Japan, Bonin Island | JN845109 | JN845227 | |
| Clade IIII— | LIP PAM/GUAD 11.04 Paratype | Guadeloupe Island (France) | - | |
| LIP FH2004090503 Holotype | Guadeolupe Island (France) | |||
| MA–Fungi 83779 (under | Argentina | KF988437 | KF988567 | |
| Clade IV— | MA–Fungi 56971 Isotype | Cameroon | KF988416 | KF988544 |
| Clade V— | LIP MR/GUY 12.171 | French Guiana | - | |
| LIP RC/GUY 12.086 | French Guiana | - | ||
| INPA 259950 | Brazil | |||
| MA–Fungi 67886 Paratype | Brazil | - | ||
| Clade VI— | LIP RC/MART 03.015 Holotype | France, Martinique Island | - | |
| LIP CL/MART 08.112 Paratype | France, Martinique Island | |||
| MA–Fungi 36141 (under | Panama | KF988438 | KF988568 | |
| UFRN–Fungos 2308 Paratype | Brazil | |||
| Clade VII— | MA–Fungi 83780 (under | Argentina | KF988439 | KF988569 |
| UFRN–Fungos 2315 Holotype | Brazil | KX761175 | KX761176 | |
| UFRN–Fungos 2256 Paratype | Brazil | KX761180 | - | |
| UFRN–Fungos 2759 | Brazil | KX761177 | KX761178 | |
| Clade VIII— | LIP RC/GUY 08.035 Paratype | French Guiana | - | |
| UFRN–Fungos 2835 Holotype | Brazil | |||
| UFRN–Fungos 1857 | Brazil | |||
| Clade IX— | UFRN–Fungos 2286 Holotype | Brazil | ||
| UFRN–Fungos 2834 Paratype | Brazil | |||
| UFRN–Fungos 2851 Paratype | Costa Rica | - | ||
| Clade X— | CORD-MLHC 14 Holotype | Argentina | KM260664 | - |
| CORD-MLHC 15 | Argentina | KM260665 | - | |
| CORD-MLHC 16 | Argentina | KM260666 | - | |
| Clade XI— | LIP CL/MART 08.067B Paratype | France, Martinique Island | ||
| LIP PAM/MART 12.100 Holotype | France, Martinique Island | |||
| UFRN–Fungos 1214 (under | Brazil | KJ127029 | JQ683662 | |
| UFRN–Fungos 2844 Paratype | Brazil | |||
| Clade XII— | LIP CL/GUAD 06.010 Paratype | France, Guadeloupe Island | - | |
| LIP CL/GUAD 06.056 Paratype | France, Guadeloupe Island | - | ||
| LIP CL/MART 04.001 Paratype | France, Martinique Island | - | ||
| LIP JLC12030103 Paratype | French Guiana | |||
| LIP MR/GUY 12.004 Paratype | French Guiana | - | ||
| UFRN–Fungos 348 Paratype | Brazil | - | ||
| UFRN–Fungos 2850 Paratype | Brazil | |||
| CEPEC 1391 Paratype | Brazil | - | ||
| UFRN–Fungos 2149 Paratype | Brazil | |||
| UFRN–Fungos 2302 Holotype | Brazil | |||
| INPA 259949 Paratype | Brazil | |||
| UFRN–Fungos 1741 Paratype | Brazil | KJ127030 | ||
| UFRN–Fungos 2655 Paratype | Brazil | - | ||
| UFRN–Fungos 168 Paratype | Brazil | - | ||
| UFRN–Fungos 1803 Paratype | Brazil | |||
| MA-Fungi 83785 | Argentina | KF988446 | KF988581 |
Fig 1Bayesian trees of ITS (on the left) and ITS/LSU (on the right) nrDNA sequences of Geastrum species.
Geastrum velutinum was used as out-group. Terminal branches are labeled with GenBank accession numbers. For further details, see Table 1. Numbers at the nodes indicate the Maximum Parsimony bootstrap, bootstrap values obtained from Maximum likelihood, and Posterior Probabilities from Bayesian analysis (MPbs /MLbs/ PP). Thick-lined branches are those with higher support (MPbs and MLbs higher than 85%, and PP higher than 0.85). Asterisk denotes fully supported branches in all three analyses.
Fig 2Type collections of Geastrum hirsutum and Geastrum schweinitzii.
(A) Geastrum hirsutum MA-Fungi 67886, paratype. (B) Geastrum hirsutum UFRN-Fungos 245, holotype. (C) Geastrum schweinitzii K (M) 180188, type. (D) Geastrum schweinitzii K (M) 180187, isotype. Photo credits C, D: Donis Alfredo. A2, B2, C2, D2 bar = 5mm.
Fig 3Analysis involving species of Geastrum schweinitzii complex.
(A) Bayesian analysis conducted in Beast 2 software along 50 million generations. (B) Topo-phylogenetic and (C) phylogenetic network representations.
Fig 5Geastrum hirsutum and allies.
(A) Geastrum brunneocapillatum sp. nov. (B) Geastrum hirsutum. (C) Geastrum pusillipilosum. (D) Geastrum rubellum sp. nov. A1, B1, C1, D1 Expanded basidiomata. A2, B2, C2, D2 Unexpanded Basidiomata. A3, B3, C3, D3 Exoperidium detail. A4, B4, C4, D4 Basidiospores under LM. A5, B5, C5, D5 basidiospores under SEM. A1 bar = 2 mm; A2, A3, C2, bar = 1 mm; B1, B2, B3, C1, D2 bar = 2 mm; C3 bar = 0.1 mm; D1 bar = 4 mm; A4, B4, C4, D4 bar = 5 μm; A5, B5, C5, D5 bar = 1 μm.