Literature DB >> 30726080

Accurate Hit Estimation for Iterative Screening Using Venn-ABERS Predictors.

Ruben Buendia1, Thierry Kogej2, Ola Engkvist2, Lars Carlsson2,3, Henrik Linusson1, Ulf Johansson1, Paolo Toccaceli3, Ernst Ahlberg4.   

Abstract

Iterative screening has emerged as a promising approach to increase the efficiency of high-throughput screening (HTS) campaigns in drug discovery. By learning from a subset of the compound library, inferences on what compounds to screen next can be made by predictive models. One of the challenges of iterative screening is to decide how many iterations to perform. This is mainly related to difficulties in estimating the prospective hit rate in any given iteration. In this article, a novel method based on Venn-ABERS predictors is proposed. The method provides accurate estimates of the number of hits retrieved in any given iteration during an HTS campaign. The estimates provide the necessary information to support the decision on the number of iterations needed to maximize the screening outcome. Thus, this method offers a prospective screening strategy for early-stage drug discovery.

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Year:  2019        PMID: 30726080     DOI: 10.1021/acs.jcim.8b00724

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  1 in total

1.  Changing the HTS Paradigm: AI-Driven Iterative Screening for Hit Finding.

Authors:  Gabriel H S Dreiman; Magda Bictash; Paul V Fish; Lewis Griffin; Fredrik Svensson
Journal:  SLAS Discov       Date:  2020-08-18       Impact factor: 3.341

  1 in total

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