Celia van der Merwe1, Neda Jahanshad2, Josh W Cheung2, Mary Mufford1, Nynke A Groenewold3, Nastassja Koen4, Rajkumar Ramesar1, Shareefa Dalvie4, James A Knowles5, Derrek P Hibar6, Caroline M Nievergelt7, Karestan C Koenen8, Israel Liberzon9, Kerry J Ressler10, Sarah E Medland11, Rajendra A Morey12, Paul M Thompson2, Dan J Stein13. 1. Division of Human Genetics. University of Cape Town. Cape Town. South Africa. 2. Imaging Genetics Center. Mark and Mary Neuroimaging & Informatics Institute. Keck School of Medicine of the University of Southern California. Marina del Rey, CA. USA. 3. Department of Psychiatry and MRC Unit on Risk & Resilience. University of Cape Town. Cape Town. South Africa. 4. Department of Psychiatry and MRC Unit on Risk & Resilience. University of Cape Town. Cape Town. South Africa; Groote Schuur Hospital. Cape Town. South Africa. 5. Department of Cell Biology, SUNY Downstate Medical Centre, New York, NY. USA. 6. Department of Psychiatry and Behavioral Sciences. Duke University Medical Center. Durham, NC. USA. 7. Veterans Affairs San Diego Healthcare System and Veterans Affairs Center of Excellence for Stress and Mental Health. La Jolla, CA. USA; Department of Psychiatry. University of California San Diego. La Jolla, CA. USA. 8. Broad Institute of MIT and Harvard. Stanley Center for Psychiatric Research. Boston, MA. USA; Psychiatric and Neurodevelopmental Genetics Unit, Center for Human Genetic Research, and Department of Psychiatry. Massachusetts General Hospital. Boston, MA. USA; Department of Epidemiology. Harvard T. H. Chan School of Public Health. Cambridge, MA. USA. 9. Department of Psychiatry. University of Michigan. Ann Arbor, MI. USA; Ann Arbor Veterans Affairs Hospital. Ann Arbor, MI. USA. 10. Division of Depression and Anxiety Disorders. McClean Hospital. Belmont, MA. USA. 11. QIMR Berghofer Medical Research Institute. Brisbane. Australia. 12. Department of Psychiatry and Behavioral Sciences. Duke University Medical Center. Durham, NC. USA; Durham VA Medical Center. Durham, NC. USA. 13. Department of Psychiatry and MRC Unit on Risk & Resilience. University of Cape Town. Cape Town. South Africa; Groote Schuur Hospital. Cape Town. South Africa. Electronic address: dan.stein@uct.ac.za.
Abstract
BACKGROUND: There have been considerable recent advances in understanding the genetic architecture of anxiety disorders and posttraumatic stress disorder (PTSD), as well as the underlying neurocircuitry of these disorders. However, there is little work on the concordance of genetic variations that increase risk for these conditions, and that influence subcortical brain structures. We undertook a genome-wide investigation of the overlap between the genetic influences from single nucleotide polymorphisms (SNPs) on volumes of subcortical brain structures and genetic risk for anxiety disorders and PTSD. METHOD: We obtained summary statistics of genome-wide association studies (GWAS) of anxiety disorders (Ncases = 7016, Ncontrols = 14,745), PTSD (European sample; Ncases = 2424, Ncontrols = 7113) and of subcortical brain structures (N = 13,171). SNP Effect Concordance Analysis (SECA) and Linkage Disequilibrium (LD) Score Regression were used to examine genetic pleiotropy, concordance, and genome-wide correlations respectively. SECAs conditional false discovery was used to identify specific risk variants associated with anxiety disorders or PTSD when conditioning on brain related traits. RESULTS: For anxiety disorders, we found evidence of significant concordance between increased anxiety risk variants and variants associated with smaller amygdala volume. Further, by conditioning on brain volume GWAS, we identified novel variants that associate with smaller brain volumes and increase risk for disorders: rs56242606 was found to increase risk for anxiety disorders, while two variants (rs6470292 and rs683250) increase risk for PTSD, when conditioning on the GWAS of putamen volume. LIMITATIONS: Despite using the largest available GWAS summary statistics, the analyses were limited by sample size. CONCLUSIONS: These preliminary data indicate that there is genome wide concordance between genetic risk factors for anxiety disorders and those for smaller amygdala volume, which is consistent with research that supports the involvement of the amygdala in anxiety disorders. It is notable that a genetic variant that contributes to both reduced putamen volume and PTSD plays a key role in the glutamatergic system. Further work with GWAS summary statistics from larger samples, and a more extensive look at the genetics underlying brain circuits, is needed to fully delineate the genetic architecture of these disorders and their underlying neurocircuitry.
BACKGROUND: There have been considerable recent advances in understanding the genetic architecture of anxiety disorders and posttraumatic stress disorder (PTSD), as well as the underlying neurocircuitry of these disorders. However, there is little work on the concordance of genetic variations that increase risk for these conditions, and that influence subcortical brain structures. We undertook a genome-wide investigation of the overlap between the genetic influences from single nucleotide polymorphisms (SNPs) on volumes of subcortical brain structures and genetic risk for anxiety disorders and PTSD. METHOD: We obtained summary statistics of genome-wide association studies (GWAS) of anxiety disorders (Ncases = 7016, Ncontrols = 14,745), PTSD (European sample; Ncases = 2424, Ncontrols = 7113) and of subcortical brain structures (N = 13,171). SNP Effect Concordance Analysis (SECA) and Linkage Disequilibrium (LD) Score Regression were used to examine genetic pleiotropy, concordance, and genome-wide correlations respectively. SECAs conditional false discovery was used to identify specific risk variants associated with anxiety disorders or PTSD when conditioning on brain related traits. RESULTS: For anxiety disorders, we found evidence of significant concordance between increased anxiety risk variants and variants associated with smaller amygdala volume. Further, by conditioning on brain volume GWAS, we identified novel variants that associate with smaller brain volumes and increase risk for disorders: rs56242606 was found to increase risk for anxiety disorders, while two variants (rs6470292 and rs683250) increase risk for PTSD, when conditioning on the GWAS of putamen volume. LIMITATIONS: Despite using the largest available GWAS summary statistics, the analyses were limited by sample size. CONCLUSIONS: These preliminary data indicate that there is genome wide concordance between genetic risk factors for anxiety disorders and those for smaller amygdala volume, which is consistent with research that supports the involvement of the amygdala in anxiety disorders. It is notable that a genetic variant that contributes to both reduced putamen volume and PTSD plays a key role in the glutamatergic system. Further work with GWAS summary statistics from larger samples, and a more extensive look at the genetics underlying brain circuits, is needed to fully delineate the genetic architecture of these disorders and their underlying neurocircuitry.
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