Literature DB >> 30699356

Multivalent Role of Human TFIID in Recruiting Elongation Components at the Promoter-Proximal Region for Transcriptional Control.

Dipika Yadav1, Koushik Ghosh1, Subham Basu1, Robert G Roeder2, Debabrata Biswas3.   

Abstract

Despite substantial progress in our understanding of the players involved and the regulatory mechanisms controlling the initiation and elongation steps of transcription, little is known about the recruitment of elongation factors at promoter-proximal regions for the initiation-to-elongation transition. Here, we show evidence that human TFIID, which initiates pre-initiation complex (PIC) assembly, contributes to regulating the recruitment of super-elongation complex (SEC) components at the promoter-proximal region through interactions among selective TAF and SEC components. In vitro direct interactions, coupled with cell-based assays, identified an important poly-Ser domain within SEC components that are involved in their interaction with TFIID. DNA template-based recruitment assays, using purified components, further show a direct role for poly-Ser domain-dependent TFIID interaction in recruiting SEC components on target DNA. Consistently, ChIP and RNA analyses have shown the importance of this mechanism in TFIID-dependent SEC recruitment and target gene expression within mammalian cells.
Copyright © 2019 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  AF9; P-TEFb; TAF6; TFIID; elongation; pause; poly-Ser; super elongation complex; transcription

Mesh:

Substances:

Year:  2019        PMID: 30699356      PMCID: PMC6368250          DOI: 10.1016/j.celrep.2019.01.012

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  48 in total

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Journal:  Mol Cell       Date:  2005-08-19       Impact factor: 17.970

2.  Human mediator subunit MED26 functions as a docking site for transcription elongation factors.

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Journal:  Cell       Date:  2011-07-08       Impact factor: 41.582

3.  The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription.

Authors:  Z Yang; Q Zhu; K Luo; Q Zhou
Journal:  Nature       Date:  2001-11-15       Impact factor: 49.962

Review 4.  The metazoan Mediator co-activator complex as an integrative hub for transcriptional regulation.

Authors:  Sohail Malik; Robert G Roeder
Journal:  Nat Rev Genet       Date:  2010-10-13       Impact factor: 53.242

5.  Pausing of RNA polymerase II regulates mammalian developmental potential through control of signaling networks.

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Journal:  Mol Cell       Date:  2015-03-12       Impact factor: 17.970

6.  PAF1 regulation of promoter-proximal pause release via enhancer activation.

Authors:  Fei Xavier Chen; Peng Xie; Clayton K Collings; Kaixiang Cao; Yuki Aoi; Stacy A Marshall; Emily J Rendleman; Michal Ugarenko; Patrick A Ozark; Anda Zhang; Ramin Shiekhattar; Edwin R Smith; Michael Q Zhang; Ali Shilatifard
Journal:  Science       Date:  2017-08-31       Impact factor: 47.728

7.  ELL-associated factor 2 (EAF2), a functional homolog of EAF1 with alternative ELL binding properties.

Authors:  Federico Simone; Roger T Luo; Paul E Polak; Joseph J Kaberlein; Michael J Thirman
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9.  Stable pausing by RNA polymerase II provides an opportunity to target and integrate regulatory signals.

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Authors:  Telmo Henriques; Benjamin S Scruggs; Michiko O Inouye; Ginger W Muse; Lucy H Williams; Adam B Burkholder; Christopher A Lavender; David C Fargo; Karen Adelman
Journal:  Genes Dev       Date:  2018-01-29       Impact factor: 11.361

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  11 in total

1.  Human FKBP5 Negatively Regulates Transcription through Inhibition of P-TEFb Complex Formation.

Authors:  Dheerendra Pratap Mall; Subham Basu; Koushik Ghosh; Nidhi Kumari; Abhishake Lahiri; Sandip Paul; Debabrata Biswas
Journal:  Mol Cell Biol       Date:  2021-11-15       Impact factor: 5.069

2.  TFIID Enables RNA Polymerase II Promoter-Proximal Pausing.

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Review 3.  The hunt for RNA polymerase II elongation factors: a historical perspective.

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Review 4.  Multifaceted roles of YEATS domain-containing proteins and novel links to neurological diseases.

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Review 5.  Regulation of Promoter Proximal Pausing of RNA Polymerase II in Metazoans.

Authors:  Roberta Dollinger; David S Gilmour
Journal:  J Mol Biol       Date:  2021-02-25       Impact factor: 6.151

Review 6.  Evolution of Regulated Transcription.

Authors:  Oleg V Bylino; Airat N Ibragimov; Yulii V Shidlovskii
Journal:  Cells       Date:  2020-07-12       Impact factor: 6.600

Review 7.  Cat and Mouse: HIV Transcription in Latency, Immune Evasion and Cure/Remission Strategies.

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Journal:  Br J Cancer       Date:  2021-10-30       Impact factor: 7.640

9.  Genetic and epigenetic associations of ANRIL with coronary artery disease and risk factors.

Authors:  Bayi Xu; Zhixia Xu; Yequn Chen; Nan Lu; Zhouwu Shu; Xuerui Tan
Journal:  BMC Med Genomics       Date:  2021-10-06       Impact factor: 3.063

10.  DOT1L complex regulates transcriptional initiation in human erythroleukemic cells.

Authors:  Aiwei Wu; Junhong Zhi; Tian Tian; Ali Cihan; Murat A Cevher; Ziling Liu; Yael David; Tom W Muir; Robert G Roeder; Ming Yu
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-06       Impact factor: 12.779

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