Literature DB >> 31439940

The hunt for RNA polymerase II elongation factors: a historical perspective.

Ronald C Conaway1,2, Joan W Conaway3,4.   

Abstract

The discovery of the three eukaryotic nuclear RNA polymerases paved the way for serious biochemical investigations of eukaryotic transcription and the identification of eukaryotic transcription factors. Here we describe this adventure from our vantage point, with a focus on the hunt for factors that regulate elongation by RNA polymerase II.

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Year:  2019        PMID： 31439940     DOI： 10.1038/s41594-019-0283-1

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


  81 in total

1.  The RNA polymerase II elongation complex. Factor-dependent transcription elongation involves nascent RNA cleavage.

Authors:  D Reines; P Ghanouni; Q Q Li; J Mote
Journal:  J Biol Chem       Date:  1992-08-05       Impact factor: 5.157

2.  Elongation factor-dependent transcript shortening by template-engaged RNA polymerase II.

Authors:  D Reines
Journal:  J Biol Chem       Date:  1992-02-25       Impact factor: 5.157

Review 3.  Promoting elongation with transcript cleavage stimulatory factors.

Authors:  Rachel N Fish; Caroline M Kane
Journal:  Biochim Biophys Acta       Date:  2002-09-13

Review 4.  Breaking barriers to transcription elongation.

Authors:  Abbie Saunders; Leighton J Core; John T Lis
Journal:  Nat Rev Mol Cell Biol       Date:  2006-08       Impact factor: 94.444

5.  Purification of a factor from Ehrlich ascites tumor cells specifically stimulating RNA polymerase II.

Authors:  K Sekimizu; N Kobayashi; D Mizuno; S Natori
Journal:  Biochemistry       Date:  1976-11-16       Impact factor: 3.162

6.  Spatial and temporal patterns of E74 transcription during Drosophila development.

Authors:  C S Thummel; K C Burtis; D S Hogness
Journal:  Cell       Date:  1990-04-06       Impact factor: 41.582

Review 7.  Getting up to speed with transcription elongation by RNA polymerase II.

Authors:  Iris Jonkers; John T Lis
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-18       Impact factor: 94.444

8.  Short capped hnRNA precursor chains in HeLa cells: continued synthesis in the presence of 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole.

Authors:  I Tamm; T Kikuchi; J E Darnell; M Salditt-Georgieff
Journal:  Biochemistry       Date:  1980-06-10       Impact factor: 3.162

9.  Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons.

Authors:  Iris Jonkers; Hojoong Kwak; John T Lis
Journal:  Elife       Date:  2014-04-29       Impact factor: 8.140

10.  RECQL5 controls transcript elongation and suppresses genome instability associated with transcription stress.

Authors:  Marco Saponaro; Theodoros Kantidakis; Richard Mitter; Gavin P Kelly; Mark Heron; Hannah Williams; Johannes Söding; Aengus Stewart; Jesper Q Svejstrup
Journal:  Cell       Date:  2014-05-15       Impact factor: 41.582
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  4 in total

Review 1.  Causes and consequences of RNA polymerase II stalling during transcript elongation.

Authors:  Melvin Noe Gonzalez; Daniel Blears; Jesper Q Svejstrup
Journal:  Nat Rev Mol Cell Biol       Date:  2020-11-18       Impact factor: 94.444

2.  CDKL5 kinase controls transcription-coupled responses to DNA damage.

Authors:  Taran Khanam; Ivan Muñoz; Florian Weiland; Thomas Carroll; Michael Morgan; Barbara N Borsos; Vasiliki Pantazi; Meghan Slean; Miroslav Novak; Rachel Toth; Paul Appleton; Tibor Pankotai; Houjiang Zhou; John Rouse
Journal:  EMBO J       Date:  2021-10-04       Impact factor: 11.598

3.  Elongation factor TFIIS is essential for heat stress adaptation in plants.

Authors:  István Szádeczky-Kardoss; Henrik Mihály Szaker; Radhika Verma; Éva Darkó; Aladár Pettkó-Szandtner; Dániel Silhavy; Tibor Csorba
Journal:  Nucleic Acids Res       Date:  2022-02-28       Impact factor: 16.971

4.  NDF is a transcription factor that stimulates elongation by RNA polymerase II.

Authors:  Jia Fei; Jun Xu; Ziwei Li; Kevin Xu; Dong Wang; George A Kassavetis; James T Kadonaga
Journal:  Genes Dev       Date:  2022-03-10       Impact factor: 12.890
  4 in total

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