Literature DB >> 30691364

Structure-Based Vaccine Antigen Design.

Barney S Graham1, Morgan S A Gilman2, Jason S McLellan2.   

Abstract

Enabled by new approaches for rapid identification and selection of human monoclonal antibodies, atomic-level structural information for viral surface proteins, and capacity for precision engineering of protein immunogens and self-assembling nanoparticles, a new era of antigen design and display options has evolved. While HIV-1 vaccine development has been a driving force behind these technologies and concepts, clinical proof-of-concept for structure-based vaccine design may first be achieved for respiratory syncytial virus (RSV), where conformation-dependent access to neutralization-sensitive epitopes on the fusion glycoprotein determines the capacity to induce potent neutralizing activity. Success with RSV has motivated structure-based stabilization of other class I viral fusion proteins for use as immunogens and demonstrated the importance of structural information for developing vaccines against other viral pathogens, particularly difficult targets that have resisted prior vaccine development efforts. Solving viral surface protein structures also supports rapid vaccine antigen design and application of platform manufacturing approaches for emerging pathogens.

Entities:  

Keywords:  X-ray crystallography; coronavirus; electron microscopy; immunization; influenza; nanoparticle display; platform technology; respiratory syncytial virus; vaccine development

Mesh:

Substances:

Year:  2019        PMID: 30691364      PMCID: PMC6936610          DOI: 10.1146/annurev-med-121217-094234

Source DB:  PubMed          Journal:  Annu Rev Med        ISSN: 0066-4219            Impact factor:   13.739


  92 in total

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Journal:  Cell       Date:  2002-03-08       Impact factor: 41.582

2.  Recovery from infants with respiratory illness of a virus related to chimpanzee coryza agent (CCA). I. Isolation, properties and characterization.

Authors:  R CHANOCK; B ROIZMAN; R MYERS
Journal:  Am J Hyg       Date:  1957-11

Review 3.  Protective antiviral antibodies that lack neutralizing activity: precedents and evolution of concepts.

Authors:  Alan L Schmaljohn
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4.  Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen.

Authors:  Jesper Pallesen; Nianshuang Wang; Kizzmekia S Corbett; Daniel Wrapp; Robert N Kirchdoerfer; Hannah L Turner; Christopher A Cottrell; Michelle M Becker; Lingshu Wang; Wei Shi; Wing-Pui Kong; Erica L Andres; Arminja N Kettenbach; Mark R Denison; James D Chappell; Barney S Graham; Andrew B Ward; Jason S McLellan
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-14       Impact factor: 11.205

5.  Efficacy of the Herpes Zoster Subunit Vaccine in Adults 70 Years of Age or Older.

Authors:  Anthony L Cunningham; Himal Lal; Martina Kovac; Roman Chlibek; Shinn-Jang Hwang; Javier Díez-Domingo; Olivier Godeaux; Myron J Levin; Janet E McElhaney; Joan Puig-Barberà; Carline Vanden Abeele; Timo Vesikari; Daisuke Watanabe; Toufik Zahaf; Anitta Ahonen; Eugene Athan; Jose F Barba-Gomez; Laura Campora; Ferdinandus de Looze; H Jackson Downey; Wayne Ghesquiere; Iris Gorfinkel; Tiina Korhonen; Edward Leung; Shelly A McNeil; Lidia Oostvogels; Lars Rombo; Jan Smetana; Lily Weckx; Wilfred Yeo; Thomas C Heineman
Journal:  N Engl J Med       Date:  2016-09-15       Impact factor: 91.245

6.  Rational HIV immunogen design to target specific germline B cell receptors.

Authors:  Joseph Jardine; Jean-Philippe Julien; Sergey Menis; Takayuki Ota; Oleksandr Kalyuzhniy; Andrew McGuire; Devin Sok; Po-Ssu Huang; Skye MacPherson; Meaghan Jones; Travis Nieusma; John Mathison; David Baker; Andrew B Ward; Dennis R Burton; Leonidas Stamatatos; David Nemazee; Ian A Wilson; William R Schief
Journal:  Science       Date:  2013-03-28       Impact factor: 47.728

7.  Virus-like display of a neo-self antigen reverses B cell anergy in a B cell receptor transgenic mouse model.

Authors:  Bryce Chackerian; Marisa R Durfee; John T Schiller
Journal:  J Immunol       Date:  2008-05-01       Impact factor: 5.422

8.  Influences on trimerization and aggregation of soluble, cleaved HIV-1 SOSIP envelope glycoprotein.

Authors:  Per Johan Klasse; Rafael S Depetris; Robert Pejchal; Jean-Philippe Julien; Reza Khayat; Jeong Hyun Lee; Andre J Marozsan; Albert Cupo; Nicolette Cocco; Jacob Korzun; Anila Yasmeen; Andrew B Ward; Ian A Wilson; Rogier W Sanders; John P Moore
Journal:  J Virol       Date:  2013-07-03       Impact factor: 5.103

9.  A live RSV vaccine with engineered thermostability is immunogenic in cotton rats despite high attenuation.

Authors:  Christopher C Stobart; Christina A Rostad; Zunlong Ke; Rebecca S Dillard; Cheri M Hampton; Joshua D Strauss; Hong Yi; Anne L Hotard; Jia Meng; Raymond J Pickles; Kaori Sakamoto; Sujin Lee; Michael G Currier; Syed M Moin; Barney S Graham; Marina S Boukhvalova; Brian E Gilbert; Jorge C G Blanco; Pedro A Piedra; Elizabeth R Wright; Martin L Moore
Journal:  Nat Commun       Date:  2016-12-21       Impact factor: 14.919

10.  Structure-based energetics of protein interfaces guides foot-and-mouth disease virus vaccine design.

Authors:  Abhay Kotecha; Julian Seago; Katherine Scott; Alison Burman; Silvia Loureiro; Jingshan Ren; Claudine Porta; Helen M Ginn; Terry Jackson; Eva Perez-Martin; C Alistair Siebert; Guntram Paul; Juha T Huiskonen; Ian M Jones; Robert M Esnouf; Elizabeth E Fry; Francois F Maree; Bryan Charleston; David I Stuart
Journal:  Nat Struct Mol Biol       Date:  2015-09-21       Impact factor: 15.369

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  54 in total

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Review 2.  Subdominance in Antibody Responses: Implications for Vaccine Development.

Authors:  Gunnar Lindahl
Journal:  Microbiol Mol Biol Rev       Date:  2020-11-25       Impact factor: 11.056

3.  Computational tools for modern vaccine development.

Authors:  Andaleeb Sajid; Yogendra Singh; Pratyoosh Shukla
Journal:  Hum Vaccin Immunother       Date:  2019-12-18       Impact factor: 3.452

4.  SARS-CoV-2 mRNA Vaccine Development Enabled by Prototype Pathogen Preparedness.

Authors:  Kizzmekia S Corbett; Darin Edwards; Sarah R Leist; Olubukola M Abiona; Seyhan Boyoglu-Barnum; Rebecca A Gillespie; Sunny Himansu; Alexandra Schäfer; Cynthia T Ziwawo; Anthony T DiPiazza; Kenneth H Dinnon; Sayda M Elbashir; Christine A Shaw; Angela Woods; Ethan J Fritch; David R Martinez; Kevin W Bock; Mahnaz Minai; Bianca M Nagata; Geoffrey B Hutchinson; Kapil Bahl; Dario Garcia-Dominguez; LingZhi Ma; Isabella Renzi; Wing-Pui Kong; Stephen D Schmidt; Lingshu Wang; Yi Zhang; Laura J Stevens; Emily Phung; Lauren A Chang; Rebecca J Loomis; Nedim Emil Altaras; Elisabeth Narayanan; Mihir Metkar; Vlad Presnyak; Catherine Liu; Mark K Louder; Wei Shi; Kwanyee Leung; Eun Sung Yang; Ande West; Kendra L Gully; Nianshuang Wang; Daniel Wrapp; Nicole A Doria-Rose; Guillaume Stewart-Jones; Hamilton Bennett; Martha C Nason; Tracy J Ruckwardt; Jason S McLellan; Mark R Denison; James D Chappell; Ian N Moore; Kaitlyn M Morabito; John R Mascola; Ralph S Baric; Andrea Carfi; Barney S Graham
Journal:  bioRxiv       Date:  2020-06-11

Review 5.  Progress in the Development of Structure-Based Vaccines.

Authors:  Sunil Thomas; Ann Abraham
Journal:  Methods Mol Biol       Date:  2022

Review 6.  Effective high-throughput isolation of fully human antibodies targeting infectious pathogens.

Authors:  Lutz Gieselmann; Christoph Kreer; Meryem Seda Ercanoglu; Nathalie Lehnen; Matthias Zehner; Philipp Schommers; Julian Potthoff; Henning Gruell; Florian Klein
Journal:  Nat Protoc       Date:  2021-05-25       Impact factor: 13.491

7.  Bottom-up de novo design of functional proteins with complex structural features.

Authors:  Che Yang; Fabian Sesterhenn; Jaume Bonet; Eva A van Aalen; Leo Scheller; Luciano A Abriata; Johannes T Cramer; Xiaolin Wen; Stéphane Rosset; Sandrine Georgeon; Theodore Jardetzky; Thomas Krey; Martin Fussenegger; Maarten Merkx; Bruno E Correia
Journal:  Nat Chem Biol       Date:  2021-01-04       Impact factor: 15.040

Review 8.  Can We AlphaFold Our Way Out of the Next Pandemic?

Authors:  Matthew K Higgins
Journal:  J Mol Biol       Date:  2021-06-08       Impact factor: 5.469

9.  "Just in Time": The Role of Cryo-Electron Microscopy in Combating Recent Pandemics.

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Review 10.  Structure-Based and Rational Design of a Hepatitis C Virus Vaccine.

Authors:  Johnathan D Guest; Brian G Pierce
Journal:  Viruses       Date:  2021-05-05       Impact factor: 5.818

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