Literature DB >> 30690198

Implementation and relevance of FAIR data principles in biopharmaceutical R&D.

John Wise1, Alexandra Grebe de Barron2, Andrea Splendiani3, Beeta Balali-Mood4, Drashtti Vasant2, Eric Little5, Gaspare Mellino6, Ian Harrow4, Ian Smith7, Jan Taubert8, Kees van Bochove9, Martin Romacker6, Peter Walgemoed10, Rafael C Jimenez11, Rainer Winnenburg12, Tom Plasterer13, Vibhor Gupta14, Victoria Hedley15.   

Abstract

Biopharmaceutical industry R&D, and indeed other life sciences R&D such as biomedical, environmental, agricultural and food production, is becoming increasingly data-driven and can significantly improve its efficiency and effectiveness by implementing the FAIR (findable, accessible, interoperable, reusable) guiding principles for scientific data management and stewardship. By so doing, the plethora of new and powerful analytical tools such as artificial intelligence and machine learning will be able, automatically and at scale, to access the data from which they learn, and on which they thrive. FAIR is a fundamental enabler for digital transformation.
Copyright © 2019 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2019        PMID: 30690198     DOI: 10.1016/j.drudis.2019.01.008

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  19 in total

1.  Identification and Mapping Real-World Data Sources for Heart Failure, Acute Coronary Syndrome, and Atrial Fibrillation.

Authors:  Rachel Studer; Claudio Sartini; Kiliana Suzart-Woischnik; Rumjhum Agrawal; Harshul Natani; Simrat K Gill; Sara Bruce Wirta; Folkert W Asselbergs; Richard Dobson; Spiros Denaxas; Dipak Kotecha
Journal:  Cardiology       Date:  2021-11-15       Impact factor: 1.869

Review 2.  Selection of data sets for FAIRification in drug discovery and development: Which, why, and how?

Authors:  Ebtisam Alharbi; Yojana Gadiya; David Henderson; Andrea Zaliani; Alejandra Delfin-Rossaro; Anne Cambon-Thomsen; Manfred Kohler; Gesa Witt; Danielle Welter; Nick Juty; Caroline Jay; Ola Engkvist; Carole Goble; Dorothy S Reilly; Venkata Satagopam; Vassilios Ioannidis; Wei Gu; Philip Gribbon
Journal:  Drug Discov Today       Date:  2022-05-17       Impact factor: 8.369

3.  FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources.

Authors:  Daniel J B Clarke; Lily Wang; Alex Jones; Megan L Wojciechowicz; Denis Torre; Kathleen M Jagodnik; Sherry L Jenkins; Peter McQuilton; Zachary Flamholz; Moshe C Silverstein; Brian M Schilder; Kimberly Robasky; Claris Castillo; Ray Idaszak; Stanley C Ahalt; Jason Williams; Stephan Schurer; Daniel J Cooper; Ricardo de Miranda Azevedo; Juergen A Klenk; Melissa A Haendel; Jared Nedzel; Paul Avillach; Mary E Shimoyama; Rayna M Harris; Meredith Gamble; Rudy Poten; Amanda L Charbonneau; Jennie Larkin; C Titus Brown; Vivien R Bonazzi; Michel J Dumontier; Susanna-Assunta Sansone; Avi Ma'ayan
Journal:  Cell Syst       Date:  2019-10-30       Impact factor: 10.304

4.  Disclosure of Pharmaceutical Industry Funding of Patient Organisations in Nordic Countries: Can Industry Self-Regulation Deliver on its Transparency Promise?

Authors:  Dylan Pashley; Piotr Ozieranski; Shai Mulinari
Journal:  Int J Health Serv       Date:  2022-03-01       Impact factor: 1.851

5.  The bio.tools registry of software tools and data resources for the life sciences.

Authors:  Jon Ison; Hans Ienasescu; Piotr Chmura; Emil Rydza; Hervé Ménager; Matúš Kalaš; Veit Schwämmle; Björn Grüning; Niall Beard; Rodrigo Lopez; Severine Duvaud; Heinz Stockinger; Bengt Persson; Radka Svobodová Vařeková; Tomáš Raček; Jiří Vondrášek; Hedi Peterson; Ahto Salumets; Inge Jonassen; Rob Hooft; Tommi Nyrönen; Alfonso Valencia; Salvador Capella; Josep Gelpí; Federico Zambelli; Babis Savakis; Brane Leskošek; Kristoffer Rapacki; Christophe Blanchet; Rafael Jimenez; Arlindo Oliveira; Gert Vriend; Olivier Collin; Jacques van Helden; Peter Løngreen; Søren Brunak
Journal:  Genome Biol       Date:  2019-08-12       Impact factor: 13.583

6.  Sharing data, sharing methods, sharing science.

Authors:  Sergio Pantano
Journal:  MethodsX       Date:  2021-12-14

Review 7.  Establishing Patient Registries for Rare Diseases: Rationale and Challenges.

Authors:  Vanessa Boulanger; Marissa Schlemmer; Suzanne Rossov; Allison Seebald; Pamela Gavin
Journal:  Pharmaceut Med       Date:  2020-06

8.  Experiment design driven FAIRification of omics data matrices, an exemplar.

Authors:  Philippe Rocca-Serra; Susanna-Assunta Sansone
Journal:  Sci Data       Date:  2019-12-12       Impact factor: 6.444

9.  GenoPheno: cataloging large-scale phenotypic and next-generation sequencing data within human datasets.

Authors:  Alba Gutiérrez-Sacristán; Carlos De Niz; Cartik Kothari; Sek Won Kong; Kenneth D Mandl; Paul Avillach
Journal:  Brief Bioinform       Date:  2021-01-18       Impact factor: 11.622

10.  Orchestrating and sharing large multimodal data for transparent and reproducible research.

Authors:  Anthony Mammoliti; Petr Smirnov; Minoru Nakano; Zhaleh Safikhani; Christopher Eeles; Heewon Seo; Sisira Kadambat Nair; Arvind S Mer; Ian Smith; Chantal Ho; Gangesh Beri; Rebecca Kusko; Eva Lin; Yihong Yu; Scott Martin; Marc Hafner; Benjamin Haibe-Kains
Journal:  Nat Commun       Date:  2021-10-04       Impact factor: 14.919

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