Literature DB >> 30688395

Assessment of a Large Enzyme-Drug Complex by Proton-Detected Solid-State NMR Spectroscopy without Deuteration.

Suresh K Vasa1, Himanshu Singh1,2, Kristof Grohe1, Rasmus Linser1,2.   

Abstract

Solid-state NMR spectroscopy has recently enabled structural biology with small amounts of non-deuterated proteins, largely alleviating the classical sample production demands. Still, despite the benefits for sample preparation, successful and comprehensive characterization of complex spin systems in the few cases of higher-molecular-weight proteins has thus far relied on traditional 13 C-detected methodology or sample deuteration. Herein we show for a 29 kDa carbonic anhydrase:acetazolamide complex that different aspects of solid-state NMR assessment of a complex spin system can be successfully accessed using a non-deuterated, 500 μg sample in combination with adequate spectroscopic tools. The shown access to protein structure, protein dynamics, as well as biochemical parameters in amino acid sidechains, such as histidine protonation states, will be transferable to proteins that are not expressible in E. coli.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  protein function; protein structure; proton detection; solid-state NMR spectroscopy; ultrafast MAS

Mesh:

Substances:

Year:  2019        PMID: 30688395     DOI: 10.1002/anie.201811714

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  14 in total

1.  Exact distance measurements for structure and dynamics in solid proteins by fast-magic-angle-spinning NMR.

Authors:  Kristof Grohe; Evgeny Nimerovsky; Himanshu Singh; Suresh K Vasa; Benedikt Söldner; Beat Vögeli; Chad M Rienstra; Rasmus Linser
Journal:  Chem Commun (Camb)       Date:  2019-06-14       Impact factor: 6.222

2.  MAS dependent sensitivity of different isotopomers in selectively methyl protonated protein samples in solid state NMR.

Authors:  Kai Xue; Riddhiman Sarkar; Zdenek Tosner; Daniela Lalli; Carina Motz; Benita Koch; Guido Pintacuda; Bernd Reif
Journal:  J Biomol NMR       Date:  2019-09-12       Impact factor: 2.835

Review 3.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

Review 4.  From Angstroms to Nanometers: Measuring Interatomic Distances by Solid-State NMR.

Authors:  Alexander A Shcherbakov; João Medeiros-Silva; Nhi Tran; Martin D Gelenter; Mei Hong
Journal:  Chem Rev       Date:  2021-10-25       Impact factor: 72.087

5.  Nucleotide Binding Modes in a Motor Protein Revealed by 31 P- and 1 H-Detected MAS Solid-State NMR Spectroscopy.

Authors:  Thomas Wiegand; Maarten Schledorn; Alexander A Malär; Riccardo Cadalbert; Alexander Däpp; Laurent Terradot; Beat H Meier; Anja Böckmann
Journal:  Chembiochem       Date:  2019-09-30       Impact factor: 3.164

6.  100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids.

Authors:  Lauriane Lecoq; Maarten Schledorn; Shishan Wang; Susanne Smith-Penzel; Alexander A Malär; Morgane Callon; Michael Nassal; Beat H Meier; Anja Böckmann
Journal:  Front Mol Biosci       Date:  2019-07-24

7.  Protein Side-Chain-DNA Contacts Probed by Fast Magic-Angle Spinning NMR.

Authors:  Denis Lacabanne; Julien Boudet; Alexander A Malär; Pengzhi Wu; Riccardo Cadalbert; Loic Salmon; Frédéric H-T Allain; Beat H Meier; Thomas Wiegand
Journal:  J Phys Chem B       Date:  2020-11-25       Impact factor: 2.991

8.  The Active Site of a Prototypical "Rigid" Drug Target is Marked by Extensive Conformational Dynamics.

Authors:  Himanshu Singh; Chandan K Das; Suresh K Vasa; Kristof Grohe; Lars V Schäfer; Rasmus Linser
Journal:  Angew Chem Int Ed Engl       Date:  2020-11-16       Impact factor: 15.336

9.  Asparagine and Glutamine Side-Chains and Ladders in HET-s(218-289) Amyloid Fibrils Studied by Fast Magic-Angle Spinning NMR.

Authors:  Thomas Wiegand; Alexander A Malär; Riccardo Cadalbert; Matthias Ernst; Anja Böckmann; Beat H Meier
Journal:  Front Mol Biosci       Date:  2020-09-30

10.  Intracellular Binding/Unbinding Kinetics of Approved Drugs to Carbonic Anhydrase II Observed by in-Cell NMR.

Authors:  Enrico Luchinat; Letizia Barbieri; Matteo Cremonini; Alessio Nocentini; Claudiu T Supuran; Lucia Banci
Journal:  ACS Chem Biol       Date:  2020-09-30       Impact factor: 5.100

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